Publications from the faculty and research scientists of the Graduate School of Oceanography.

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Manuscripts from 2008

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Community and household determinants of water quality in coastal Ghana, Stephen T. McGarvey, Justin Buszin, Holly Reed, David C. Smith, Zarah Rahman, Catherine Andrzejewski, Kofi Awusabo-Asare, and Michael J. White

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Impact of the Reduced Drag Coefficient on Ocean Wave Modeling under Hurricane Conditions, Il-Ju Moon, Isaac Ginis, and Tetsu Hara

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Detecting air-water and surface-deep water gradients of PCBs using polyethylene passive samplers, Eric J. Morgan and Rainer Lohmann

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Validation of Tropospheric Emission Spectrometer (TES) nadir ozone profiles using ozonesonde measurements, Ray Nassar, Jennifer A. Logan, Helen M. Worden, Inna A. Megretskaia, Kevin W. Bowman, Gregory B. Osterman, Anne M. Thompson, David W. Tarasick, Shermane Austin, Hans Claude, Manvendra K. Dubey, Wayne K. Hocking, Bryan J. Johnson, Everette Joseph, John Merrill, Gary A. Morris, Mike Newchurch, Samuel J. Oltmans, Françoise Posny, F. J. Schmidlin, Holger Vömel, David N. Whiteman, and Jacquelyn C. Witte

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Late Pliocene-early Pleistocene 100-ka problem, Junsheng Nie, John King, and Xiaomin Fang

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AC magnetic susceptibility studies of Chinese red clay sediments between 4.8 and 4.1 Ma: Paleoceanographic and paleoclimatic implications, Junsheng Nie, John King, Mike Jackson, Xiaomin Fang, and Yougui Song

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Surface-water freshening: A cause for the onset of North Pacific stratification from 2.75 Ma onward?, Junsheng Nie, John King, Zhengyu Liu, Steve Clemens, Warren Prell, and Xiaomin Fang

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Correlation between the magnetic susceptibility record of the Chinese aeolian sequences and the marine benthic oxygen isotope record, Junsheng Nie, John W. King, and Xiaomin Fang

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Link between benthic oxygen isotopes and magnetic susceptibility in the red-clay sequence on the Chinese Loess Plateau, Junsheng Nie, John W. King, and Xiaomin Fang

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Tibetan uplift intensified the 400 k.y. signal in paleoclimate records at 4 Ma, Junsheng Nie, John W. King, and Xiaomin Fang

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PAHs in air and seawater along a North-South Atlantic transect: Trends, processes and possible sources, Luca Nizzetto, Rainer Lohmann, Rosalinda Gioia, Annika Jahnke, Christian Temme, Jordi Dachs, Pierre Herckes, Antonio Di Guardo, and Kevin C. Jones

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Relationship of predation potential to mortality of Calanus finmarchicus on Georges Bank, northwest Atlantic, Mark D. Ohman, Edward G. Durbin, Jeffrey A. Runge, Barbara K. Sullivan, and David B. Field

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Constraints on the Pleistocene chronology of sediments from the Lomonosov Ridge, Matthew O'Regan, John King, Jan Backman, Martin Jakobsson, Heiko Pälike, Kathryn Moran, Clifford Heil, Tatsuhiko Sakamoto, Thomas M. Cronin, and Richard W. Jordan

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A comparison of in situ bottom pressure array measurements with GRACE estimates in the Kuroshio Extension, Jae Hun Park, D. Randolph Watts, Kathleen A. Donohue, and Steven R. Jayne

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HOx chemistry during INTEX‐A 2004: Observation, model calculation, and comparison with previous studies, Xinrong Ren, Jennifer R. Olson, James H. Crawford, William H. Brune, Jingqiu Mao, Robert B. Long, Zhong Chen, Gao Chen, Melody A. Avery, Glen W. Sachse, John D. Barrick, Glenn S. Diskin, L. Greg Huey, Alan Fried, Ronald C. Cohen, Brian Heikes, Paul O. Wennberg, Hanwant B. Singh, Donald R. Blake, and Richard E. Shetter

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Finite frequency tomography in southeastern Tibet: Evidence for the causal relationship between mantle lithosphere delamination and the north-south trending rifts, Yong Ren and Yang Shen

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Nitrogen isotopic evidence for a poleward decrease in surface nitrate within the ice age Antarctic, Rebecca S. Robinson and Daniel M. Sigman

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Free falling probe current and temperature measurement system, T. Rossby and Viola Wolter

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The formation of biogeochemical laminations in Lake Bosumtwi, Ghana, and their usefulness as indicators of past environmental changes, Timothy M. Shanahan, Jonathan T. Overpeck, J. Warren Beck, C. Winston Wheeler, John A. Peck, John W. King, and Christopher A. Scholz

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Abrupt changes in the water balance of tropical West Africa during the late quaternary, Timothy M. Shanahan, Jonathan T. Overpeck, Christopher A. Scholz, J. Warren Beck, John Peck, and John W. King

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Scanning micro-X-ray fluorescence elemental mapping: A new tool for the study of laminated sediment records, T. M. Shanahan, J. T. Overpeck, J. B. Hubeny, J. King, F. S. Hu, K. Hughen, G. Miller, and J. Black

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Hydrogen isotopes in Mariana arc melt inclusions: Implications for subduction dehydration and the deep-Earth water cycle, A. M. Shaw, E. H. Hauri, T. P. Fischer, D. R. Hilton, and K. A. Kelley

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Component-Dependent Fréchet Sensitivity Kernels and Utility of Three-Component Seismic Records, Yang Shen, Zhigang Zhang, and Li Zhao

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Air-sea interaction over ocean fronts and eddies, R. J. Small, S. P. deSzoeke, S. P. Xie, L. O'Neill, H. Seo, Q. Song, P. Cornillon, M. Spall, and S. Minobe

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Rigid topographic control of currents in the Nordic Seas, Henrik Søiland, M. D. Prater, and T. Rossby

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Integrable motion of a vortex dipole in an axisymmetric flow, G. G. Suyrin, X. Perrot, and X. Carton

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Copepod feeding response to varying Alexandrium spp. cellular toxicity and cell concentration among natural plankton samples, Gregory J. Teegarden, Robert G. Campbell, Dean T. Anson, Aaron Ouellett, Benjamin A. Westman, and Edward G. Durbin

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Prediction of magmatic water contents via measurement of H2O in clinopyroxene phenocrysts, Jennifer A. Wade, Terry Plank, Erik H. Hauri, Katherine A. Kelley, Kurt Roggensack, and Mindy Zimmer

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Quantification of co-occurring reaction rates in deep subseafloor sediments, Guizhi Wang, Arthur J. Spivack, Scott Rutherford, Uri Manor, and Steven D'Hondt

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Chlorine stable isotopes and halogen concentrations in convergent margins with implications for the Cl isotopes cycle in the ocean, Wei Wei, Miriam Kastner, and Arthur Spivack

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Reply to comment on: "Chlorine stable isotopes and halogen concentrations in convergent margins with implications for the Cl isotopes cycle in the ocean", Wei Wei, Miriam Kastner, and Arthur Spivack

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Current broadening as a mechanism for anticyclogenesis at the Northwest Corner of the North Atlantic Current, William Woityra and T. Rossby

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A comparison between warm-water fish assemblages of Narragansett Bay and those of Long Island Sound waters, Abby Jane M. Wood, Jeremy S. Collie, and Jonathan A. Hare

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Improving the Ocean Initialization of Coupled Hurricane–Ocean Models Using Feature-Based Data Assimilation, Richard M. Yablonsky and Isaac Ginis

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Mitochondrial cob and cox1 Genes and Editing of the Corresponding mRNAs in Dinophysis acuminata from Narragansett Bay, with Special Reference to the Phylogenetic Position of the Genus Dinophysis, Huan Zhang, Debashish Bhattacharya, Lucie Maranda, and Senjie Lin

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Numerical simulation of strong ground motion for the Ms8.0 Wenchuan earthquake of 12 May 2008, Wei Zhang, Yang Shen, and Xiao Fei Chen

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Cross-dependence of finite-frequency compressional waveforms to shear seismic wave speeds, Zhigang Zhang and Yang Shen

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Comment on “Current system east of the Ryukyu Islands” by A. Nagano et al., Xiao-Hua Zhu, Jae-Hun Park, Mark Wimbush, and Cheng-Hao Yang

Manuscripts from 2007

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Characterization of pyroclastic fall and flow deposits from the 1815 eruption of Tambora volcano, Indonesia using ground-penetrating radar, Lewis J. Abrams and Haraldur Sigurdsson

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Dissolution of biogenic ooze over basement edifices in the equatorial Pacific with implications for hydrothermal ventilation of the oceanic crust, Barbara A. Bekins, Arthur J. Spivack, Earl E. Davis, and Larry A. Mayer

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The Operational GFDL Coupled Hurricane–Ocean Prediction System and a Summary of Its Performance, Morris A. Bender, Isaac Ginis, Robert Tuleya, Biju Thomas, and Timothy Marchok

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High water contents in basaltic magmas from Irazú Volcano, Costa Rica, Ezra R. Benjamin, Terry Plank, Jennifer A. Wade, Katherine A. Kelley, Erik H. Hauri, and Guillermo E. Alvarado

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Direct measurements of the convective recycling of the upper troposphere, Timothy H. Bertram, Anne E. Perring, Paul J. Wooldridge, John D. Crounse, Alan J. Kwan, Paul O. Wennberg, Eric Scheuer, Jack Dibb, Melody Avery, Glen Sachse, Stephanie A. Vay, James H. Crawford, Cameron S. McNaughton, Antony Clarke, Kenneth E. Pickering, Henry Fuelberg, Greg Huey, Donald R. Blake, Hanwant B. Singh, Samuel R. Hall, Richard E. Shetter, Alan Fried, Brian G. Heikes, and Ronald C. Cohen

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Radiolytic hydrogen and microbial respiration in subsurface sediments, Carly C. Blair, Steven D'Hondt, Arthur J. Spivack, and Richard H. Kingsley

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The hypothalamic-pituitary-thyroid (HPT) axis in fish and its role in fish development and reproduction, Michael L. Blanton and Jennifer L. Specker

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Abrupt change in tropical African climate linked to the bipolar seesaw over the past 55,000 years, E. T. Brown, T. C. C. Johnson, C. A. Scholz, A. S. Cohen, and J. W. King

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The colonial ascidian Didemnum sp. A: Current distribution, basic biology and potential threat to marine communities of the northeast and west coasts of North America, S. G. Bullard, G. Lambert, M. R. Carman, J. Byrnes, R. B. Whitlatch, G. Ruiz, R. J. Miller, L. Harris, P. C. Valentine, Jeremy S. Collie, J. Pederson, D. C. McNaught, A. N. Cohen, R. G. Asch, J. Dijkstra, and K. Heinonen

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Reconstruction of contaminant trends in a salt wedge estuary with sediment cores dated using a multiple proxy approach, Mark G. Cantwell, John W. King, Robert M. Burgess, and Peter G. Appleby

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Exploring Submarine Arc Volcanoes, Steven Carey and Haraldur Sigurdsson

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Four-dimensional data assimilation experiments with International Consortium for Atmospheric Research on Transport and Transformation ozone measurements, Tianfeng Chai, Gregory R. Carmichael, Youhua Tang, Adrian Sandu, Michael Hardesty, Peter Pilewskie, Sallie Whitlow, Edward V. Browell, Melody A. Avery, Philippe Nédélec, John T. Merrill, Anne M. Thompson, and Eric Williams

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Ecological consequences of early Late Pleistocene megadroughts in tropical Africa, Andrew S. Cohen, Jeffrey R. Stone, Kristina R. M. Beuning, Lisa E. Park, Peter N. Reinthal, David Dettman, Christopher A. Scholz, Thomas C. Johnson, John W. King, Michael R. Talbot, Erik T. Brown, and Sarah J. Ivory

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Corrigendum to "Age model for a continuous, ca 250-ka Quaternary lacustrine record from Bear Lake, Utah-Idaho" [Quaternary Science Reviews 25 (2006) 2271-2282] (DOI:10.1016/j.quascirev.2005.10.015), S. M. Colman, D. S. Kaufman, J. Bright, C. Heil, J. W. King, W. E. Dean, J. G. Rosenbaum, R. M. Forester, J. L. Bishcoff, M. Perkins, and J. P. McGeehin

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Exploring Subseafloor Life with the Integrated Ocean Drilling Program, Steven D'Hondt, Fumio Inagaki, Timothy Ferdelman, Bo Barker Jørgensen, Kenji Kato, Paul Kemp, Patricia Sobecky, Mitchell Sogin, and Ken Takai

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Rhizon Sampling of Pore Waters on Scientific Drilling Expeditions: An Example from the IODP Expedition 302, Arctic Coring Expedition (ACEX), Gerald R. Dickens, Martin Koelling, David C. Smith, and Luzie Schnieders

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Reassessment of the gut pigment method for estimating in situ zooplankton ingestion, Edward G. Durbin and Robert G. Campbell

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Seasonal and spatial dynamics of Centropages typicus and C. hamatus in the western North Atlantic, Edward Durbin and Joseph Kane

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High-resolution magnetostratigraphy of the Neogene Huaitoutala section in the eastern Qaidam Basin on the NE Tibetan Plateau, Qinghai Province, China and its implication on tectonic uplift of the NE Tibetan Plateau, Xiaomin Fang, Weilin Zhang, Qingquan Meng, Junping Gao, Xiaoming Wang, John King, Chunhui Song, Shuang Dai, and Yunfa Miao

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Geochemistry of rare earth elements in early-diagenetic miocene phosphatic concretions of Patagonia, Argentina: Phosphogenetic implications, A. M. Fazio, R. A. Scasso, L. N. Castro, and S. Carey

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Instability threshold of a negatively buoyant fountain, Peter D. Friedman, Vidya D. Vadakoot, William J. Meyer, and Steven Carey

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Validation of SeaWiFS chlorophyll a in Massachusetts Bay, Kimberly J.W. Hyde, John E. O'Reilly, and Candace A. Oviatt

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The early Miocene onset of a ventilated circulation regime in the Arctic Ocean, Martin Jakobsson, Jan Backman, Bert Rudels, Jonas Nycander, Martin Frank, Larry Mayer, Wilfried Jokat, Francesca Sangiorgi, Matthew O'Regan, Henk Brinkhuis, John King, and Kathryn Moran

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Validation of Aura Microwave Limb Sounder Ozone by ozonesonde and lidar measurements, Y. B. Jiang, J. Merrill, and et al

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Geochemical variation along and across the Central American Miocene paleoarc in Honduras and Nicaragua, Benjamin R. Jordan, Haraldur Sigurdsson, Steven N. Carey, Robert Rogers, and Jan Ehrenborg

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Petrogenesis of Central American Tertiary ignimbrites and associated Caribbean Sea tephra, B. R. Jordan, H. Sigurdsson, S. Carey, S. Lundin, R. D. Rogers, B. Singer, and M. Barquero-Molina

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Age constraints on the origin and growth history of a deep-water coral mound in the northeast Atlantic drilled during Integrated Ocean Drilling Program Expedition 307, Akihiro Kano, Timothy G. Ferdelman, Trevor Williams, Jean Pierre Henriet, Tsuyoshi Ishikawa, Noriko Kawagoe, Chiduru Takashima, Yoshihiro Kakizaki, Kohei Abe, Saburo Sakai, Emily L. Browing, Xianghui Li, M. S. Andres, M. Bjerager, B. A. Cragg, B. De Mol, B. Dorschel, A. Foubert, T. D. Frank, Y. Fuwa, P. Gaillot, J. J. Gharib, J. M. Gregg, V. A.I. Huvenne, P. Léonide, K. Mangelsdorf, X. Monteys, I. Novosel, R. O'Donnell, A. Rüggeberg, V. Samarkin, K. Sasaki, A. J. Spivack, A. Tanaka, J. Titschack, and D. van Rooij

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A Different Sort of Invader: The Second Manatee to Visit Rhode Island, Robert D. Kenney

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An international and multidisciplinary drilling project into a young complex impact structure: The 2004 ICDP Bosumtwi Crater Drilling Project - An overview, Christian Koeberl, Bernd Milkereit, Jonathan T. Overpeck, Christopher A. Scholz, Philip Y.O. Amoako, Daniel Boamah, Sylvester K. Danuor, Tobias Karp, Jochem Kueck, Robert E. Hecky, John W. King, and John A. Peack

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A 640 kyr geomagnetic and palaeoclimatic record from Lake Baikal sediments, Vadim A. Kravchinsky, Michael E. Evans, John A. Peck, Hideo Sakai, Mikhail A. Krainov, John W. King, and Mikhail I. Kuzmin

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A model of the air-sea momentum flux and breaking-wave distribution for strongly forced wind waves, Tobias Kukulka, Tetsu Hara, and Stephen E. Belcher

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Bimodal volcanism at the Katla subglacial caldera, Iceland: Insight into the geochemistry and petrogenesis of rhyolitic magmas, Christian Lacasse, H. Sigurdsson, S. N. Carey, H. Jóhannesson, L. E. Thomas, and N. W. Rogers

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The Stanley unconformity in Lake Huron basin: Evidence for a climate-driven closed lowstand about 7900 14C BP, with similar implications for the Chippewa lowstand in Lake Michigan basin, C. F.M. Lewis, C. W. Heil, J. B. Hubeny, J. W. King, T. C. Moore, and D. K. Rea

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Summertime influence of Asian pollution in the free troposphere over North America, Q. Liang, L. Jaeglé, R. C. Hudman, S. Turquety, D. J. Jacob, M. A. Avery, E. V. Browell, G. W. Sachse, D. R. Blake, W. Brune, X. Ren, R. C. Cohen, J. E. Dibb, A. Fried, H. Fuelberg, M. Porter, Brian G. Heikes, G. Huey, H. B. Singh, and P. O. Wennberg

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Global fate of POPs: Current and future research directions, Rainer Lohmann, Knut Breivik, Jordi Dachs, and Derek Muir

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Prorocentrum lima (Dinophyceae) in northeastern USA coastal waters. I. Abundance and distribution, Lucie Maranda, Susannah Corwin, and Paul E. Hargraves

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Quantitative discrimination of magma fragmentation and pyroclastic transport processes using the fractal spectrum technique, Anton Maria and Steven Carey

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A deep cyclonic gyre in the Australian-Antarctic Basin, Michael S. McCartney and Kathleen A. Donohue

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Hypoxic events in Narragansett Bay, Rhode Island, during the summer of 2001, D. Christopher Melrose, Candace A. Oviatt, and Mark S. Berman

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Noise level correlates with manatee use of foraging habitats, Jennifer L. Miksis-Olds, Percy L. Donaghay, James H. Miller, Peter L. Tyack, and Jeffrey A. Nystuen

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A Physics-Based Parameterization of Air–Sea Momentum Flux at High Wind Speeds and Its Impact on Hurricane Intensity Predictions, Il-Ju Moon, Isaac Ginis, Tetsu Hara, and Biju Thomas

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Dissipative losses in nonlinear internal waves propagating across the continental shelf, J. N. Moum, D. M. Farmer, E. L. Shroyer, W. D. Smyth, and L. Armi

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Geochemical evidence for African dust inputs to soils of western Atlantic islands: Barbados, the Bahamas, and Florida, Daniel R. Muhs, James R. Budahn, Joseph M. Prospero, and Steven Carey

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Enhancement mechanisms of magnetic susceptibility in the Chinese red-clay sequence, Junsheng Nie, John W. King, and Xiaomin Fang

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Nitrogen Inputs to Rhode Island Coastal Salt Ponds - Too Much of a Good Thing, Scott W. Nixon and Betty A. Buckley

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Production patterns in Massachusetts Bay with outfall relocation, Candace A. Oviatt, Kimberly J.W. Hyde, Aimee A. Keller, and Jefferson T. Turner

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Response to the Comment by B. Hönisch, N.G. Hemming, B. Loose on "A critical evaluation of the boron isotope-pH proxy: The accuracy of ancient ocean pH estimates", M. Pagani and A. Spivack

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Chemical composition of sediments subducting at the Izu-Bonin trench, Terry Plank, Katherine A. Kelley, Richard W. Murray, and Lacie Quintin Stern

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Atmospheric mercury over the NE Pacific during spring 2002: Gradients, residence time, upper troposphere lower stratosphere loss, and long‐range transport, L. F. Radke, H. R. Friedli, and Brian G. Heikes

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Rain in Shallow Cumulus Over the Ocean: The RICO Campaign, Robert M. Rauber, Brian G. Heikes, and et al

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In the Driver's Seat: Rico and Education, Robert M. Rauber, Haiwei Shen, and et al

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Carbon isotopic evidence for chemocline upward excursions during the end-Permian event, Anthony Riccardi, Lee R. Kump, Michael A. Arthur, and Steven D'Hondt

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Seasonal Variability of the South Equatorial Current Bifurcation in the Atlantic Ocean: A Numerical Study, Regina R. Rodrigues, Lewis M. Rothstein, and Mark Wimbush

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Design of a gas tight water sampler for AUV operations, Chris Roman and Richard Camilli

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Preliminary model tests for the design of a gliding deep water elevator, Chris Roman, Todd Gregory, Eric Martin, Alex Sanguinetti, and Jenna Drummond

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Diversity in the genus Skeletonema (bacillariophyceae): III. Phylogenetic position and morphological variability of Skeletonema costatum and Skeletonema grevillei, with the description of Skeletonema ardens sp. nov., Diana Sarno, Wiebe H.C.F. Kooistra, Sergio Balzano, Paul E. Hargraves, and Adriana Zingone

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A trajectory‐based estimate of the tropospheric ozone column using the residual method, M. R. Schoeberl, J. Merrill, and et al

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East African Megadroughts between 135 and 75 Thousand Years Ago and Bearing on Early-Modern Human Origins, Christopher A. Scholz, Thomas C. Johnson, Andrew S. Cohen, John W. King, John A. Peck, Johnathan T. Overpeck, Michael R. Talbot, Erik T. Brown, Leonard Kalindekafe, Philip Y.O. Amoako, Robert P. Lyons, Timothy M. Shanahan, Isla S. Castañeda, Clifford W. Heil, Steven L. Forman, Lanny R. McHargue, Kristina R. Beuning, Jeanette Gomez, and James Pierson

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The environmental and geomorphological context of the volcano, Haraldur Sigurdsson

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Hydrogen peroxide, methyl hydroperoxide, and formaldehyde over North America and the North Atlantic, Julie A. Snow, Brian G. Heikes, Haiwei Shen, Daniel W. O'Sullivan, Alan Fried, and Jim Walega

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Balancing end-to-end budgets of the Georges Bank ecosystem, J. H. Steele, J. S. Collie, J. J. Bisagni, D. J. Gifford, M. J. Fogarty, J. S. Link, B. K. Sullivan, M. E. Sieracki, A. R. Beet, D. G. Mountain, E. G. Durbin, D. Palka, and W. T. Stockhausen

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Comparison of Canadian air quality forecast models with tropospheric ozone profile measurements above midlatitude North American during the IONS/ICARTT campaign: Evidence for stratospheric input, David W. Tarasick, M. D. Moran, Anne M. Thompson, T. Carey-Smith, Y. Rochon, V. S. Bouchet, W. Gong, P. A. Makar, C. Stroud, S. Ménard, L. P. Crevier, S. Cousineau, J. A. Pudykiewicz, A. Kallaur, R. Moffet, R. Ménard, A. Robichaud, Owen R. Cooper, Samuel J. Oltmans, Jacquelyn C. Witte, Gerry Forbes, B. J. Johnson, J. Merrill, J. L. Moody, G. Morris, Michael J. Newchurch, F. J. Schmidlin, and Everette Joseph