Publications from the faculty and research scientists of the Graduate School of Oceanography.
Manuscripts from 2012
Coastal Exploration of the Southern Black Sea Off Ereğli and Sinop, Turkey, Michael L. Brennan, Dan Davis, Chris Roman, Ilya V. Buynevich, Alexis Catsambis, Meko Kofahl, Maureen Merrigan, Suna Tuzun, Muhammet Duman, Derya Urkmez, J. Ian Vaughn, and Tufan Turanli
Submarine Volcanism in the Straits of Sicily, Steven N. Carey, Katherine L. C. Bell, Michael Marani, Mauro Rosi, Edward T. Baker, Chris Roman, Marco Pistolesi, and Joshua Kelly
Airborne lidar detection and characterization of internal waves in a shallow fjord, James H. Churnside, Richard D. Marchbanks, Jennifer H. Lee, Joseph A. Shaw, Alan Weidmann, and Percy L. Donaghay
Krill feeding on sediment in the Gulf of Maine (North Atlantic), Alison C. Cleary, Edward G. Durbin, and Tatiana A. Rynearson
A fisheries risk-assessment framework to evaluate trade-offs among management options in the presence of time-varying productivity, Jeremy S. Collie, Randall M. Peterman, and Brett M. Zuehlke
A Quantitative Comparison between 1D and 3D Source Inversion Methodologies: Application to the Middle East, Brian M. Covellone and Brian K. Savage
Vibrio parahaemolyticus in Rhode Island Coastal Ponds and the Estuarine Environment of Narragansett Bay, Annie M. Cox and Marta Gomez-Chiarri
Fracture of a ridged multi-year Arctic sea ice floe, J. P. Dempsey, Y. Xie, R. M. Adamson, and D. M. Farmer
Introduction to special section on Recent Advances in the Study of Optical Variability in the Near‐Surface and Upper Ocean, T. Dickey, David Farmer, and et al
Copepod feeding and digestion rates using prey DNA and qPCR, Edward G. Durbin, Maria C. Casas, and Tatiana A. Rynearson
Passive sampling provides evidence for Newark Bay as a source of polychlorinated dibenzo-p-dioxins and furans to the New York/New Jersey, USA, atmosphere, Carey L. Friedman, Mark G. Cantwell, and Rainer Lohmann
Influence of Volatile Degassing on Initial Flow Structure and Entrainment During Undersea Volcanic Fire Fountaining Eruptions, P. D. Friedman, Steven Carey, and M. Raessi
Validation of Shear‐Wave Velocity Models of the Pacific Northwest, Haiying Gao and Yang Shen
In memory of Professor Howard A. Bern, E. Gordon Grau, Richard S. Nishioka, Alan Bern, Tetsuya Hirano, Russell Borski, Craig Clarke, Kevin Foskett, Louis J. Guillette, Taisen Iguchi, Lovell A. Jones, Christopher Loretz, Stephen McCormick, Anne MacLachlan, Carol A. Mason, Karen T. Mills, Yoshitaka Nagahama, Charles S. Nicoll, N. Harold Richman, Mark Sheridan, Jennifer L. Specker, James J. Sullivan, Timothy Turner, and Graham Young
Recent Arctic Climate Change and Its Remote Forcing of Northwest Atlantic Shelf Ecosystems, Charles H. Greene, Bruce C. Monger, Louise P. McGarry, Matthew D. Connelly, Neesha R. Schnepf, Andrew J. Pershing, Igor M. Belkin, Paula S. Ftratantoni, David G. Mountain, Robert S. Pickart, Rubao Ji, James J. Bisagni, Changsheng Chen, Sirpa M. A. Hakkinen, Dale B. Haidvogel, Jia Wang, Erica Head, Peter Smith, and Alessandra Conversi
Predator-Induced Fleeing Behaviors in Phytoplankton: A New Mechanism for Harmful Algal Bloom Formation?, Elizabeth L. Harvey and Susanne Menden-Deuer
Dominant eukaryotic export production during ocean anoxic events reflects the importance of recycled NH4+, Meytal B. Higgins, Rebecca S. Robinson, Jonathan M. Husson, Susan J. Carter, and Ann Pearson
A pipeline for structured light bathymetric mapping, Gabrielle Inglis, Clara Smart, Ian Vaughn, and Chris Roman
Global Distribution of Microbial Abundance and Biomass in Subseafloor Sediment, Jens Kallmeyer, Robert Pockalny, Rishi Ram Adhikari, David C. Smith, and Steven D'Hondt
The influence of magmatic differentiation on the oxidation state of Fe in a basaltic arc magma, Katherine A. Kelley and Elizabeth Cottrell
Field validation of polyethylene passive air samplers for parent and alkylated PAHs in Alexandria, Egypt, Mohammed A. Khairy and Rainer Lohmann
Concurrent activity of anammox and denitrifying bacteria in the Black Sea, John B. Kirkpatrick, Clara A. Fuchsman, Evgeniy Yakushev, James T. Staley, and James W. Murray
Identifying the research needs in the global assessment of toxic compounds 10 years after the signature of the Stockholm Convention, Gerhard Lammel and Rainer Lohmann
Drivers of protistan grazing pressure: Seasonal signals of plankton community composition and environmental conditions, Caitlyn Lawrence and Susanne Menden-Deuer
A complex Tibetan upper mantle: A fragmented Indian slab and no south-verging subduction of Eurasian lithosphere, Xiaofeng Liang, Eric Sandvol, Y. John Chen, Thomas Hearn, James Ni, Simon Klemperer, Yang Shen, and Frederik Tilmann
Use of passive sampling devices for monitoring and compliance checking of POP concentrations in water, Rainer Lohmann, Kees Booij, Foppe Smedes, and Branislav Vrana
PCBs and OCPs on a east-to-west transect: The importance of major currents and net volatilization for PCBs in the atlantic ocean, Rainer Lohmann, Jana Klanova, Petr Kukucka, Shifra Yonis, and Kevyn Bollinger
Endospore abundance, microbial growth and necromass turnover in deep sub-seafloor sediment, Bente Aa Lomstein, Alice T. Langerhuus, Steven D'Hondt, Bo B. Jørgensen, and Arthur J. Spivack
Mantle dynamics beneath the Pacific Northwest and the generation of voluminous back‐arc volcanism, Maureen D. Long, Christy B. Till, Kelsey A. Drunken, Richard W. Carlson, Lara S. Wagner, Matthew J. Fouch, David E. James, Timothy L. Grove, Nicholas Schmerr, and Christopher R. Kincaid
Tracing mantle sources and Samoan influence in the northwestern Lau back-arc basin, Marion L. Lytle, Katherine A. Kelley, Erik H. Hauri, James B. Gill, Dominic Papia, and Richard J. Arculus
The Metabolic Response of Pteropods to Acidification Reflects Natural CO2-Exposure in Oxygen Minimum Zones, A. E. Maas, K. F. Wishner, and B. A. Seibel
Structure-Dependent phytoplankton photosynthesis and production rates: Implications for the formation, maintenance, and decline of plankton patches, Susanne Menden-Deuer
Introduction to "Holocene water levels and paleo-hydrology of the Laurentian Great Lakes", C. F. Michael Lewis and John W. King
Near 13 day barotropic ocean response to the atmospheric forcing in the North Pacific, Hanna Na, Jae Hun Park, D. Randolph Watts, Kathleen A. Donohue, and Ho Jin Lee
Submarine volcanoes of the Kolumbo volcanic zone NE of Santorini Caldera, Greece, P. Nomikou, S. Carey, D. Papanikolaou, K. Croff Bell, D. Sakellariou, M. Alexandri, and K. Bejelou
A serpentinite-hosted ecosystem in the Southern Mariana Forearc, Yashuiko Ohara, Mark K. Reagan, Katsunori Fujikura, Hiromi Watanabe, Katsuyoshi Michibayahi, Teruaki Ishii, Robert J. Stern, Ignacio Pujana, Fernando Martinez, Guillaume Girard, Julia Ribeiro, Maryjo Brounce, Naoaki Komori, and Masashi Kino
A Cenozoic record of the equatorial Pacific carbonate compensation depth, Heiko Pälike, Mitchell W. Lyle, Hiroshi Nishi, Isabella Raffi, Andy Ridgwell, Kusali Gamage, Adam Klaus, Gary Acton, Louise Anderson, Jan Backman, Jack Baldauf, Catherine Beltran, Steven M. Bohaty, Paul Bown, William Busch, Jim E.T. Channell, Cecily O.J. Chun, Margaret Delaney, Pawan Dewangan, Tom Dunkley Jones, Kirsty M. Edgar, Helen Evans, Peter Fitch, Gavin L. Foster, Nikolaus Gussone, Hitoshi Hasegawa, Ed C. Hathorne, Hiroki Hayashi, Jens O. Herrle, Ann Holbourn, Steve Hovan, Kiseong Hyeong, Koichi Iijima, Takashi Ito, Shin Ichi Kamikuri, and Katsunori Kimoto
Comparisons of sea surface height variability observed by pressure-recording inverted echo sounders and satellite altimetry in the Kuroshio Extension, Jae Hun Park, D. R. Watts, Kathleen A. Donohue, and Karen L. Tracey
Biomarkers challenge early Miocene loess and inferred Asian desertification, Tingjiang Peng, Jijun Li, Chunhui Song, Zhijun Zhao, Jun Zhang, Zhengchuang Hui, and John W. King
Quantifying dispersal and connectivity of surface waters using observational lagrangian measurements, Christopher G. Piecuch and Tatiana A. Rynearson
Upper mantle structures beneath the Carpathian-Pannonian region: Implications for the geodynamics of continental collision, Y. Ren, G. W. Stuart, G. A. Houseman, B. Dando, C. Ionescu, E. Hegedüs, S. Radovanović, and Y. Shen
A review of nitrogen isotopic alteration in marine sediments, Rebecca S. Robinson, Markus Kienast, Ana Luiza Albuquerque, Mark Altabet, Sergio Contreras, Ricardo De Pol Holz, Nathalie Dubois, Roger Francois, Eric Galbraith, Ting-Chang Hsu, Tara Ivanochko, Samuel Jaccard, Shuh-Ji Kao, Thorsten Kiefer, Stephanie Kienkast, Moritz Lehmann, Philippe Martinez, Matthew McCarthy, Jürgen Möbius, Tom Pedersen, Tracey M. Quan, Evgeniya Ryabenko, Andreas Schmittner, Ralph Schneider, Aya Schneider-Mor, Masahito Shigemitsu, Dan Sinclair, Christopher Somes, Anja Studer, Robert Thunell, and Jin-Yu Yang
The Development of High-Resolution Seafloor Mapping Techniques, Chris Roman, Gabrielle Inglis, J. Ian Vaughn, Clara Smart, Bertrand Douillard, and Stefan Williams
Aerosol effects on microstructure and intensity of tropical cyclones, Daniel Rosenfeld, William L. Woodley, Alexander Khain, William R. Cotton, Gustavo Carrió, Isaac Ginis, and Joseph H. Golden
Partnership proposed for ocean observation, T. Rossby
Direct measurement of volume flux in the Faroe-Shetland Channel and over the Iceland-Faroe Ridge, T. Rossby and C. N. Flagg
Aerobic microbial respiration in 86-million-year-old deep-sea red clay, Hans Røy, Jens Kallmeyer, Rishi Ram Adhikari, Robert Pockalny, Bo Barker Jørgensen, and Steven D'Hondt
Shelf‐basin exchange times of Arctic surface waters estimated from 228TH/228Ra disequilibrium, M. Rutgers van der Loeff, P. Cai, I. Stimac, D. Bauch, C. Hanfland, T. Roeske, and S. Bradley Moran
Freely dissolved PBDEs in water and porewater of an urban estuary, Victoria P. Sacks and Rainer Lohmann
Tsunami triggering mechanisms associated with the 17th cent. BC Minoan eruption of thera Volcano, Greece, Dimitris Sakellariou, Grigoris Rousakis, Paraskevi Nomikou, Kathy Croff Bell, Steve Carey, and Haraldur Sigurdsson
Late Quaternary sedimentological and climate changes at Lake Bosumtwi Ghana: New constraints from laminae analysis and radiocarbon age modeling, Timothy M. Shanahan, J. Warren Beck, Jonathan T. Overpeck, Nicholas P. McKay, Jeffrey S. Pigati, John A. Peck, Christopher A. Scholz, Clifford W. Heil, and John King
Changing polar environments: Interdisciplinary challenges, Paul B. Shepson, Parisa A. Ariya, Clara J. Deal, D. James Donaldson, Thomas A. Douglas, Brice Loose, Ted Maksym, Patricia A. Matrai, Lynn M. Russell, Benjamin Saenz, Jacqueline Stefels, and Nadja Steiner
Erratum: Changing polar environments: Interdisciplinary challenges (Eos 93:11 (117-118) DOI: 10.1029/2012EO110001), Paul B. Shepson, Parisa A. Ariya, Clara J. Deal, D. James Donaldson, Thomas A. Douglas, Brice Loose, Ted Maksym, Patricia A. Matrai, Lynn M. Russell, Benjamin Saenz, Jacqueline Stefels, and Nadja Steiner
An Adaptive Framework for Selecting Environmental Monitoring Protocols to Support Ocean Renewable Energy Development, Emily J. Shumchenia, Sarah L. Smith, Jennifer McCann, Michelle Carnevale, Grover Fugate, Robert D. Kenney, John W. King, Peter W. C. Paton, Malia Schwartz, Malcolm Spaulding, and Kritopher J. Winiarski
Quantifying variation in water column photosynthetic quotient with changing field conditions in Narragansett Bay, RI, USA, Leslie M. Smith, Celine M. Silver, and Candace A. Oviatt
Propagation of Kuroshio Extension Meanders between 143° and 149°E, Karen L. Tracey, D. Randolph Watts, Kathleen A. Donohue, and Hiroshi Ichikawa
Nitrogen isotope ratio of cyanobacterial chlorophyll: Chemostat vs. batch culture, Leah E. Tsao, Rebecca S. Robinson, Meytal B. Higgins, and Ann Pearson
Structure and dynamics of the midshelf front in the New York Bight, D. S. Ullman, D. L. Codiga, D. Hebert, L. B. Decker, and C. R. Kincaid
The sources of volatile and fluid-mobile elements in the Sunda arc: A melt inclusion study from Kawah Ijen and Tambora volcanoes, Indonesia, Nathalie Vigouroux, Paul J. Wallace, Glyn Williams-Jones, Katherine Kelley, Adam J.R. Kent, and Anthony E. Williams-Jones
Molecular Subdivision of the Marine Diatom Thalassiosira rotula in Relation to Geographic Distribution, Genome Size, and Physiology, Kerry A. Whittaker, Dayna R. Rignanese, Robert J. Olson, and Tatiana A. Rynearson
Geochemistry of basalts from IODP site U1365: Implications for magmatism and mantle source signatures of the mid-Cretaceous Osbourn Trough, Guoliang Zhang, Christopher Smith-Duque, Suohan Tang, He Li, Carlos Zarikian, Steven D'Hondt, and Fumio Inagaki
Fate of chiral and achiral organochlorine pesticides in the north Atlantic bloom experiment, Lin Zhang, Terry Bidleman, Mary Jane Perry, and Rainer Lohmann
Three-dimensional anisotropic seismic wave modelling in spherical coordinates by a collocated-grid finite-difference method, Wei Zhang, Yang Shen, and Li Zhao
Manuscripts from 2011
Pacific Atmospheric Sulfur Experiment (PASE): dynamics and chemistry of the south Pacific tropical trade wind regime, Alan Bandy, Ian C. Faloona, Byron W. Blomquist, Barry J. Huebert, Antony D. Clarke, Steven G. Howell, R. L. Mauldin, Christopher A. Cantrell, James G. Hudson, Brian G. Heikes, John T. Merrill, Yuhang Wang, Daniel W. O'Sullivan, Wolfgang Nadler, and Douglas D. Davis
High resolution regional seismic attenuation tomography in eastern Tibetan Plateau and adjacent regions, Xueyang Bao, Eric Sandvol, James Ni, Thomas Hearn, Yongshun John Chen, and Yang Shen
An International Quiet Ocean Experiment, Ian L. Boyd, George Frisk, Ed Urban, Peter Tyack, Jesse Ausubel, Sophie Seeyave, Doug Cato, Brandon Southall, Michael Weise, Rex Andrew, Tomonari Akamatsu, René Dekeling, Christine Erbe, David Farmer, Roger Gentry, Tom Gross, Anthony Hawkins, Fenghua Li, Kathy Metcalf, James H. Miller, David Moretti, Cristian Rodrigo, and Tomio Shinke
Maritime History of ANZAC Cove, Michael L. Brennan, Dwight Coleman, Christopher N. Roman, Tufan Turanli, Dan Davis, Alexis Catsambis, James Moore, Maureen Merrigan, Brennan Bajdek, Daniel Whitesell, and Robert Ballard
Landscape Imaging of the Southeast Aegean Sea, Michael L. Brennan, Tufan Turanli, Bridget Buxton, Katherine L. Croff Bell, Christopher N. Roman, Meko Kofahl, Orkan Koyagasioglu, Daniel Whitesell, Thomas Chamberlain, Richard Sullivan, and Robert Ballard
Exploration of the Kolumbo Volcanic Rift Zone, Steven Carey, Katherine L. Croff Bell, Paraskevi Nomikou, Georges Vougioukalakis, Christopher N. Roman, Kathleen Cantner, Konstantina Bejelou, Maria Bourbouli, and Julie Fero Martin
Volcaniclastic processes and deposits in the deep-sea, Steven N. Carey and Jean Luc Schneider
The oxidation state of Fe in MORB glasses and the oxygen fugacity of the upper mantle, Elizabeth Cottrell and Katherine A. Kelley
Improvements to the methods used to measure bubble attenuation using an underwater acoustical resonator, Helen Czerski, Svein Vagle, David M. Farmer, and Nick Hall-Patch
Numerical investigations of seasonal and interannual variability of North Pacific subtropical mode water and its implications for Pacific climate variability, Xujing Jia Davis, Lewis M. Rothstein, William K. Dewar, and Dimitris Menemenlis
Patterns in seismic anisotropy driven by rollback subduction beneath the High Lava Plains, K. A. Druken, M. D. Long, and C. Kincaid
Detailed Comparisons of Airborne Formaldehyde Measurements with Box Models during the 2006 INTEX-B and MILAGRO Campaigns: Potential Evidence for Significant Impacts of Unmeasured and Multi-Generation Volatile Organic Carbon Compounds, A. Fried, B. G. Heikes, and et al
Resuspension of polychlorinated biphenyl-contaminated field sediment: Release to the water column and determination of site-specific K DOC, Carey L. Friedman, Rainer Lohmann, Robert M. Burgess, Monique M. Perron, and Mark G. Cantwell
Experimental Tropical Cyclone Prediction Using the GFDL 25-km-Resolution Global Atmospheric Model, Jeffrey S. Gall, Isaac Ginis, Shian-Jiann Lin, Timothy P. Marchok, and Jan-Huey Chen
A thermodynamic approach for assessing the environmental exposure of chemicals absorbed to microplastic, Todd Gouin, Nicola Roche, Rainer Lohmann, and Geoff Hodges
Extraction method influences the recovery of phytoplankton pigments from natural assemblages, Jason R. Graff and Tatiana A. Rynearson
Heterotrophic organisms dominate nitrogen fixation in the south pacific gyre, Hannah Halm, Phyllis Lam, Timothy G. Ferdelman, Gaute Lavik, Thorsten Dittmar, Julie Laroche, Steven D’Hondt, and Marcel M.M. Kuypers
Avoidance, movement, and mortality: The interactions between a protistan grazer and Heterosigma akashiwo, a harmful algal bloom species, Elizabeth L. Harvey and Susanne Menden-Deuer
Paleoenvironmental implications of taxonomic variation among δ15N values of chloropigments, Meytal B. Higgins, Felisa Wolfe-Simon, Rebecca S. Robinson, Yelun Qin, Mak A. Saito, and Ann Pearson
Southern Ocean Gas Exchange Experiment: Setting the stage, David T. Ho, Christopher L. Sabine, David Hebert, David S. Ullman, Rik Wanninkhof, Roberta C. Hamme, Peter G. Strutton, Burke Hales, James B. Edson, and Bruce R. Hargreaves
Toward a universal relationship between wind speed and gas exchange: Gas transfer velocities measured with 3He/SF6 during the Southern Ocean Gas Exchange Experiment, David T. Ho, Rik Wanninkhof, Peter Schlosser, David S. Ullman, David Hebert, and Kevin F. Sullivan
Southern ocean nitrogen and silicon dynamics during the last deglaciation, Matthew G. Horn, Charlotte P. Beucher, Rebecca S. Robinson, and Mark A. Brzezinski
Nitrogen isotopic relationship between diatom-bound and bulk organic matter of cultured polar diatoms, Matthew G. Horn, Rebecca S. Robinson, Tatiana A. Rynearson, and Daniel M. Sigman
U-series disequilibria in Kick'em Jenny submarine volcano lavas: A new view of time-scales of magmatism in convergent margins, Fang Huang, Craig C. Lundstrom, Haraldur Sigurdsson, and Zhaofeng Zhang
Northeast US precipitation variability and North American climate teleconnections interpreted from late Holocene varved sediments, J. Bradford Hubeny, John W. King, and Mike Reddin
Detection of Diffuse Sea Floor Venting Using Structured Light Imaging, Gabrielle Inglis, Clara Smart, Christopher Roman, and Steven Carey
Development of High Resolution Sea Floor Mapping Tools and Techniques, Gabrielle Inglis, J. Ian Vaughn, Clara Smart, and Christopher N. Roman
Biodiversity and Ecosystem Function in the Gulf of Maine: Pattern and Role of Zooplankton and Pelagic Nekton, Catherine L. Johnson, Jeffrey A. Runge, K. Alexandra Curtis, Edward G. Durbin, Jonathan A. Hare, Lewis S. Incze, Jason S. Link, Gary D. Melvin, Todd D. O'Brien, and Lou Van Guelpen
Insights into nitrogen cycling in the western Gulf of California from the nitrogen isotopic composition of diatom-bound organic matter, Julie F. Kalansky, Rebecca S. Robinson, and Brian N. Popp
Identifying the research and infrastructure needs for the global assessment of hazardous chemicals ten years after establishing the Stockholm convention, Jana Klánová, Miriam Diamond, Kevin Jones, Gerhard Lammel, Rainer Lohmann, Nicola Pirrone, Martin Scheringer, Catia Balducci, Terry Bidleman, Karel Bláha, Luděk Bláha, Kees Booij, Henk Bouwman, Knut Breivik, Sabine Eckhardt, Heidelore Fiedler, Philippe Garrigues, Tom Harner, Ivan Holoubek, Hayley Hung, Matthew MacLeod, Katarina Magulova, Silvia Mosca, Alberto Pistocchi, Staci Simonich, Foppe Smedes, Euripides Stephanou, Andy Sweetman, Kateřina Šebková, Marta Venier, Marco Vighi, Branislav Vrana, Frank Wania, Roland Weber, and Peter Weiss
Role of black carbon in the sorption of polychlorinated dibenzo-p-dioxins and dibenzofurans at the diamond alkali superfund site, Newark Bay, New Jersey, Matthew K. Lambert, Carey Friedman, Pamela Luey, and Rainer Lohmann
Instabilities in an Internal Solitary-like Wave on the Oregon Shelf, Levin G. Lamb and David M. Farmer
Tidal Effects on Intermediate Waters: A Case Study in the East/Japan Sea, Ho Jin Lee, Jae-Hun Park, Mark Wimbush, Kyung Tae Jung, Chan Joo Jang, Yang-Ki Cho, Young-Kyo Seo, and Jong Ho Nam
Crustal and mantle velocity models of southern Tibet from finite frequency tomography, Xiaofeng Liang, Yang Shen, Yongshun John Chen, and Yong Ren
The generation and evolution of nonlinear internal waves in the deep basin of the South China Sea, Qiang Li and David M. Farmer
Planktonic Microbes in the Gulf of Maine Area, William K.W. Li, Robert A. Andersen, Dian J. Gifford, Lewis S. Incze, Jennifer L. Martin, Cynthia H. Pilskaln, Juliette N. Rooney-Varga, Michael E. Sieracki, William H. Wilson, and Nicholas H. Wolff