All URI faculty publications that are in DigitalCommons@URI are listed here. Some articles include full-text PDFs, and some include links to the publications on journal sites. This list includes all articles that faculty members have chosen to deposit according to the URI Open Access Policy, as well as other articles. This is not a comprehensive list of scholarly publications by URI faculty members. For questions, contact the URI Libraries at digitalcommons-group@uri.edu.

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Submissions from 2006

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RTS, a rice anther-specific gene is required for male fertility and its promoter sequence directs tissue-specific gene expression in different plant species, Hong Luo, Jang Yong Lee, Qian Hu, Kimberly Nelson-Vasilchik, Timothy K. Eitas, Colin Lickwar, Albert P. Kausch, Joel M. Chandlee, and Thomas K. Hodges

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Changes in the Northwest Atlantic circulation for the 1992-95 high NAO period from a numerical model, Yiyong Luo, Mark D. Prater, Edward G. Durbin, and Lewis M. Rothstein

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Consideration of fine-scale coastal oceanography and 3-D acoustics effects for the ESME sound exposure model, James F. Lynch, John A. Colosi, Glen G. Gawarkiewicz, Timothy F. Duda, Allan D. Pierce, Mohsen Badiey, Boris G. Katsnelson, James E. Miller, William Siegmann, Ching Sang Chiu, and Arthur Newhall

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The real world: Developing information age issues forums, Mary C. MacDonald, Amanda Izenstark, Brian T. Gallagher, Jim Kinnie, and Peter Larsen

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Alternative technology indexes in the offshore oil and gas industry, Shunsuke Managi, James J. Opaluch, Di Jin, and Thomas A. Grigalunas

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JET: Dynamic join-sexit-tree amortization and scheduling for contributory key management, Yinian Mao, Yan Sun, Min Wu, and K. J. Ray Liu

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Taxonomy of Pfiesteria (Dinophyceae), Harold G. Marshall, Paul E. Hargraves, Jo Ann M. Burkholder, Matthew W. Parrow, Malte Elbrächter, Elle H. Allen, Valerie M. Knowlton, Parke A. Rublee, Wayne L. Hynes, Todd A. Egerton, David L. Remington, K. B. Wyatt, Alan J. Lewitus, and Vince C. Henrich

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Reservoir Competency of Goats for the Ap-Variant 1 Strain of Anaplasma phagocytophilum, Robert F. Massung, Thomas N. Mather, and Michael L. Levin

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Unplanned pregnancy: Does past experience influence the use of a contraceptive method?, Kristen A. Matteson, Jeffrey F. Peipert, Jenifer Allsworth, Maureen G. Phipps, and Colleen A. Redding

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Understanding maternal intentions to engage in home visiting programs, Karen McCurdy, Deborah Daro, Elizabeth Anisfeld, Aphra Katzev, Ann Keim, Craig LeCroy, Courtney McAfee, Carnot Nelson, Lydia Falconnier, William M. McGuigan, Jennifer K. Park, James Sandy, and Carolyn Winje

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Food habits and ontogenetic changes in the diet of the sandbar shark, Carcharhinus plumbeus, in Hawaii, W. David McElroy, Bradley M. Wetherbee, Carolyn S. Mostello, Christopher G. Lowe, Gerald L. Crow, and Richard C. Wass

Does a 'shadow workforce' of inactive nurses exist?, Barbara McIntosh, Mary Val Palumbo, and Betty Rambur

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Waterfowl-habitat associations during winter in an urban North Atlantic estuary, Richard A. McKinney, Scott R. McWilliams, and Michael A. Charpentier

Collection development strategies for online aggregated databases, Susan McMullen, Patricia B.M. Brennan, Joanna M. Burkhardt, and Marla Wallace

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A genetic linkage map for hazelnut (Corylus avellana L.) based on RAPD and SSR markers, Shawn A. Mehlenbacher, Rebecca N. Brown, Eduardo R. Nouhra, Tufan Gökirmak, Nahla V. Bassil, and Thomas L. Kubisiak

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{A figure is presented}Consumption of Whole-Grain Cereals during Weight Loss: Effects on Dietary Quality, Dietary Fiber, Magnesium, Vitamin B-6, and Obesity, Kathleen J. Melanson, Theodore J. Angelopoulos, Von T. Nguyen, Margaret Martini, Linda Zukley, Joshua Lowndes, Thomas J. Dube, Justin J. Fiutem, Byron W. Yount, and James M. Rippe

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Comparisons of fast repetition rate fluorescence estimated primary production and 14C uptake by phytoplankton, D. Christopher Melrose, Candace A. Oviatt, John E. O'Reilly, and Mark S. Berman

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Analysis of mycophenolic acid in saliva using liquid chromatography tandem mass spectrometry, Anisha E. Mendonza, Reginald Y. Gohh, and Fatemeh Akhlaghi

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Erratum: Sequence effects of aminofluorene-modified DNA duplexes: Thermodynamic and circular dichroism properties (Nucleic Acids Research (2006) vol. 34 (755-763)), Srinivasa Rao Meneni, Rhijuta D'Mello, Gregory Norigian, Gregory Baker, Lan Gao, M. Paul Chiarelli, and Bongsup P. Cho

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Delayed cord clamping increases infants' iron stores, Judith Mercer and Debra Erickson-Owens

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Delayed Cord Clamping in Very Preterm Infants Reduces the Incidence of Intraventricular Hemorrhage and Late-Onset Sepsis: A Randomized, Controlled Trial, Judith S. Mercer, Betty R. Vohr, Margaret M. McGrath, James F. Padbury, Michael Wallach, and William Oh

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Bio-ferrography to capture and separate polyethylene wear debris from hip simulator fluid and compared with conventional filter method, Donna M. Meyer, Adam Tillinghast, Nevan C. Hanumara, and Ana Franco

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Gravitational Quantum States of Neutrons in a Rough Waveguide, A. E. Meyerovich and V. V. Nesvizhevsky

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Matched-field inversion in the East China Sea with Tabu Search, Zoi Heleni Michalopoulou, James H. Miller, and Gopu R. Potty

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Transmission loss in manatee habitats, Jennifer L. Miksis-Olds and James H. Miller

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Formaldehyde distribution over North America: Implications for satellite retrievals of formaldehyde columns and isoprene emission, Dylan B. Millet, Daniel J. Jacob, Solène Turquety, Rynda C. Hudman, Shiliang Wu, Alan Fried, James Walega, Brian G. Heikes, Donald R. Blake, Hanwant B. Singh, Bruce E. Anderson, and Antony D. Clarke

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The identification of a limited number of vegetative compatibility groups within isolates of Sclerotinia homoeocarpa infecting Poa spp. and Agrostis palustris from temperate climates, N. A. Mitkowski and S. Colucci

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Prevalence of Ehrlichia, Borrelia, and Rickettsial agents in Amblyomma americanum (Acari: Ixodidae) collected from nine states, Tonya R. Mixson, Scott R. Campbell, James S. Gill, Howard S. Ginsberg, Mason V. Reichard, Terry L. Schulze, and Gregory A. Dasch

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Seasonal variation in mussel byssal thread mechanics, Gretchen M. Moeser and Emily Carrington

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Seasonal influence of wave action on thread production in Mytilus edulis, Gretchen M. Moeser, Heather Leba, and Emily Carrington

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Application of a nifH oligonucleotide microarray for profiling diversity of N2-fixing microorganisms in marine microbial mats, Pia H. Moisander, Lily Shiue, Grieg F. Steward, Bethany D. Jenkins, Brad M. Bebout, and Jonathan P. Zehr

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Emigration behavior of spotted salamanders on golf courses in southern Rhode Island, Katherine E. Montieth and Peter W.C. Paton

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The Cenozoic palaeoenvironment of the Arctic Ocean, Kathryn Moran, Jan Backman, Henk Brinkhuis, Steven C. Clemens, Thomas Cronin, Gerald R. Dickens, Frédérique Eynaud, Jérôme Gattacceca, Martin Jakobsson, Richard W. Jordan, Michael Kaminski, John King, Nalan Koc, Alexey Krylov, Nahysa Martinez, Jens Matthiessen, David McInroy, Theodore C. Moore, Jonaotaro Onodera, Matthew O'Regan, Heiko Pälike, Brice Rea, Domenico Rio, Tatsuhiko Sakamoto, David C. Smith, Ruediger Stein, Kristen St John, Itsuki Suto, Noritoshi Suzuki, Kozo Takahashi, Mahito Watanabe, Masanobu Yamamoto, John Farrell, Martin Frank, Peter Kubik, and Wilfried Jokat

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Soil morphology-water table cumulative duration relationships in Southern New England, Charles P. Morgan and Mark H. Stolt

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Tri-trophic effects of plant defenses: Chickadees consume caterpillars based on host leaf chemistry, Martina S. Müller, Scott R. McWilliams, David Podlesak, Jack R. Donaldson, Helen M. Bothwell, and Richard L. Lindroth

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Transculturation of Visual Signs: A Case Analysis of the Swastika, Joanne Mundorf and Guo-Ming Chen

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Identifying high- and low-success smoking cessation subgroups using signal detection analysis, Sonya B. Norman, Gregory J. Norman, Joseph S. Rossi, and James O. Prochaska

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A study of elder abuse in Korea, Jinjoo Oh, Hesook Suzie Kim, Diane Martins, and Heegul Kim

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Supplement to W. T. O’Malley’s Anglo-Irish Literature: a bibliography of dissertations, 1873-1989 (New York, 1990)., William T. O'Malley

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Nonprescription medication use by infants and children: Product labeling versus evidence-based medicine, Katherine Kelly Orr, L. Matson, and Brian J. Cowles

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Peroxide explosives, Jimmie Oxley and James Smith

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Peroxide explosives, Jimmie Oxley and James Smith

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Multiple-valued logic buses for reducing bus energy in low-power systems, E. Özer, R. Sendag, and D. Gregg

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Long-term married couples' health promotion behaviors: Identifying factors that impact decision-making, Cynthia A. Padula and Mary Sullivan

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Inspiratory muscle training: integrative review., Cynthia A. Padula and Evelyn Yeaw

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Erratum: Arctic hydrology during global warming at the Palaeocene/Eocene thermal maximum (Nature (2006) 442 (671-675)), Mark Pagani, Nikolai Pedentchouk, Matthew Huber, Appy Sluijs, Stefan Schouten, Henk Brinkhuis, Jaap S. Sinninghe Damsté, Gerald R. Dickens, Jan Backman, Steve Clemens, Thomas Cronin, Frédérique Eynaud, Jérôme Gattacceca, Martin Jakobsson, Ric Jordan, Michael Kaminski, John King, Nalân Koc, Nahysa C. Martinez, Jens Matthiessen, David McInroy, Theodore C. Moore, Kathryn Moran, Matthew O'Regan, Jonaotaro Onodera, Heiko Pälike, Brice Rea, Domenico Rio, Tatsuhiko Sakamoto, David C. Smith, Ruediger Stein, Kristen E.K. St. John, Itsuki Suto, Noritoshi Suzuki, Kozo Takahashi, and Mahito Watanabe

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Distribution and diet of four species of carcharhinid shark in the Hawaiian Islands: Evidence for resource partitioning and competitive exclusion, Yannis P. Papastamatiou, Bradley M. Wetherbee, Christopher G. Lowe, and Gerald L. Crow

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On the use of strain gages in dynamic fracture, Venkitanarayanan Parameswaran and Arun Shukla

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Second‐mode internal tides in the East China Sea deduced from historical hydrocasts and a model, Jae-Hun Park, Magdalena Andres, Paul J. Martin, Mark Wimbush, and D. Randolph Watts

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Near 5-day nonisostatic response of the Atlantic Ocean to atmospheric surface pressure deduced from sub-surface and bottom pressure measurements, Jae Hun Park and D. Randolph Watts

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Internal Tides in the Southwestern Japan/East Sea, Jae-Hun Park and D. Randolph Watts

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Rapid Variability in the Japan/East Sea: Basin Oscillations, Internal Tides, and Near-Inertial Oscillations, Jae-Hun Park, D. Randolph Watts, Mark Wimbush, Jeffrey W. Book, Karen L. Tracey, and Yongsheng Xu

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Modification of surface winds near ocean fronts: Effects of Gulf Stream rings on scatterometer (QuikSCAT, NSCAT) wind observations, Kyung Ae Park, Peter Cornillon, and Daniel L. Codiga

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Relationship between satellite-observed cold water along the Primorye coast and sea ice in the East Sea (the Sea of Japan), Kyung Ae Park, Kuh Kim, Peter C. Cornillon, and Jong Yul Chung

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High-performance liquid chromatography method for the determination of mycophenolic acid and its acyl and phenol glucuronide metabolites in human plasma, Chirag G. Patel and Fatemeh Akhlaghi

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Effects of temperature and body size on the swimming speed of larval and juvenile Atlantic cod (Gadus morhua): Implications for individual-based modelling, Myron A. Peck, Lawrence J. Buckley, and David A. Bengtson

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We are evaporating our coal mines into the air, Michael E.Q. Pilson

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Metabolic Routing of Dietary Nutrients in Birds: Effects of Diet Quality and Macronutrient Composition Revealed Using Stable Isotopes, David W. Podlesak and Scott R. McWilliams

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Toward a model for fisheries social impact assessment, Richard B. Pollnac, Susan Abbott-Jamieson, Courtland Smith, Marc L. Miller, Patricia M. Clay, and Bryan Oles

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Job satisfaction in the fishery in two Southeast Alaskan towns, Richard B. Pollnac and John J. Poggie

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Dispersion of broadband acoustic normal modes in the context of long range sediment tomography, Gopu Potty and James Miller

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Is social cognitive theory becoming a transtheoretical model? A comment on Dijkstra et al. (2006), James O. Prochaska

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Moving beyond the transtheoretical model, James O. Prochaska

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Assessing readiness for advancing women scientists using the transtheoretical model, Janice M. Prochaska, Leanne M. Mauriello, Karen J. Sherman, Lisa Harlow, Barbara Silver, and Janet Trubatch

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Comparing intervention outcomes in smokers treated for single versus multiple behavioral risks, Judith J. Prochaska, Wayne F. Velicer, James O. Prochaska, Kevin Delucchi, and Sharon M. Hall

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Impact of long-term diagenesis on δ15N of organic matter in marine sediments: Sites 1227 and 1230, Maria G. Prokopenko, Douglas E. Hammond, Arthur Spivack, and Lowell Stott

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Observations of the Subtropical Mode Water Evolution from the Kuroshio Extension System Study, Bo Qiu, Peter Hacker, Shuiming Chen, Kathleen A. Donohue, D. Randolph Watts, Nelson G. Hogg, and Steven R. Jayne

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Approximating noncausal IIR digital filters having arbitrary poles, including new hilbert transformer designs, via forward/backward block recursion, Charles M. Rader and Leland B. Jackson

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Population trends and flight behavior of the American burying beetle, Nicrophorus americanus (Coleoptera: Silphidae), on Block Island, RI, Christopher J. Raithel, Howard S. Ginsberg, and Ming Lee Prospero

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Mechanistic study of solubility enhancement of nifedipine using vitamin E TPGS or solutol HS-15, Minal Rajebahadur, Hossein Zia, Anthony Nues, and Chong Lee

The experience of academic non-mothers in the gendered university, Karen Ramsay and Gayle Letherby

The embedded librarian, Karen M. Ramsay and Jim Kinnie

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Sequence effects of aminofluorene-modified DNA duplexes: thermodynamic and circular dichroism properties, Srinivasa Rao Meneni, Rhijuta D'Mello, Gregory Norigian, Gregory Baker, Lin Gao, M. Paul Chiarelli, and Bongsup P. Cho

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Detecting eye movements in dynamic environments, Bryan Reimer and Manbir Sodhi

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Truck sizing models for recyclables pick-up, Bryan Reimer, Manbir Sodhi, and Vaidyanathan Jayaraman

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Translocation of Molecules into Cells by pH-Dependent Insertion of a Transmembrane Helix, Yana K. Reshetnyak, Oleg A. Andreev, Ursula Lehnert, and Donald M. Engelman

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Assessment of formation strength from geophysical well logs using neural networks, Jason E. Ressler, Christopher D.P. Baxter, Kathryn Moran, Meghan Paulson, Ion Ispas, and Hans Vaziri

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An annotated catalog of salivary gland transcripts from Ixodes scapularis ticks, José M.C. Ribeiro, Francisco Alarcon-Chaidez, Ivo M. Ivo, Ben J. Mans, Thomas N. Mather, Jesus G. Valenzuela, and Stephen K. Wikel

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Trapping Phyllophaga spp. (Coleoptera: Scarabaeidae: Melolonthinae) in the United States and Canada Using Sex Attractants, Paul S. Robbins, Steven R. Alm, and et al

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Identification and Characterization of a Hemolysin Gene Cluster in Vibrio anguillarum, Jessica L. Rock and David R. Nelson

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Evaluating satellite sensor-derived indices for lyme disease risk prediction, Sarah E. Rodgers and Thomas N. Mather

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Exemplary multicultural training in school psychology programs, Margaret R. Rogers

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Exemplary efforts in psychology to recruit and retain graduate students of color, Margaret R. Rogers and Ludwin E. Molina

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Letter to the editor [2], Sara E. Rosenbaum and Fatemeh Akhlaghi

Trans-Atlantic correlations of Upper Cretaceous marine sediments: The Mid-Atlantic (USA) and Maastricht (Netherlands) regions, Marcus R. Ross and David E. Fastovsky

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Modeling Ocean ecosystems the PARADIGM program, Lewis M. Rothstein, John J. Cullen, Mark Abbott, Eric P. Chassignet, Ken Denman, Scott C. Doney, Hugh Ducklow, Katja Fennel, Mick Follows, Dale Haidvogel, Eileen Hofmann, David M. Karl, John Kindle, Ivan Lima, Mathew Maltrud, Chuck McClain, Dennis McGillicuddy, M. Josefina Olascoaga, Yvette Spitz, Jerry Wiggert, and James Yoder

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Critical examination of the use of coherent gradient sensing in measuring fracture parameters in functionally graded materials, Carl Ernst Rousseau

Mechanical and physical characterization of lightweight shotcrete used for repair, Paul Ruggiero, Arun Shukla, and Richard Brown

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Characteristics of egg production of the planktonic copepod, Calanus finmarchicus, on Georges Bank: 1994-1999, J. A. Runge, S. Plourde, P. Joly, B. Niehoff, and E. Durbin

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Estimating potential diapause duration in Calanus finmarchicus, Whitley J. Saumweber and Edward G. Durbin

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The 2005 Lake Malawi Scientific Drilling Project, Christopher A. Scholz, Andrew S. Cohen, Thomas C. Johnson, John W. King, and Kathryn Moran

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Quantifying and reducing the effects of wrong-path memory references in cache-coherent multiprocessor systems, Resit Sendag, Ayse Yilmazer, Joshua J. Yi, and Augustus K. Uht

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Paleoclimatic variations in West Africa from a record of late Pleistocene and Holocene lake level stands of Lake Bosumtwi, Ghana, Timothy M. Shanahan, Jonathan T. Overpeck, C. Winston Wheeler, J. Warren Beck, Jeffrey S. Pigati, Michael R. Talbot, Christopher A. Scholz, John Peck, and John W. King

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Guest editorial: Wireless network security, Xuemin Shen, Chuang Lin, Yan Sun, Jianping Pan, Peter Langendoerfer, and Zhenfu Cao

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Anti-influenza prodrug oseltamivir is activated by carboxylesterase human carboxylesterase 1, and the activation is inhibited by antiplatelet agent clopidogrel, Deshi Shi, Jian Yang, Dongfang Yang, Edward L. LeCluyse, Chris Black, Li You, Fatemeh Akhlaghi, and Bingfang Yan

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Denormalization strategies for data retrieval from data warehouses, Seung Kyoon Shin and G. Lawrence Sanders

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Dynamic crack propagation in particle reinforced nanocomposites and graded materials, A. Shukla

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Dynamic fracture mechanics, Arun Shukla

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Dynamic fracture of nanocomposite materials, Arun Shukla, Victor Évora, and Nitesh Jain

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Dynamic fracture in graded materials, Arun Shukla and Nitesh Jain