All URI faculty publications that are in DigitalCommons@URI are listed here. Some articles include full-text PDF's and some include links to the publications on journal sites. This list includes all articles that faculty have chosen to deposit according to the URI Open Access Policy.

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Submissions from 2021

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Extensive genome-wide duplications in the eastern oyster (Crassostrea virginica), Tejashree H. Modak, Robert Literman, Jonathan B. Puritz, Kevin M. Johnson, Erin M. Roberts, Dina Proestou, Ximing Guo, Marta Gomez-Chiarri, and Rachel S. Schwartz

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A recurrent cross-sectional qualitative study exploring how low-income mothers define snacks and reasons for offering snacks during infancy, Amy M. Moore, Maya Vadiveloo, Karen McCurdy, Kelly Bouchard, and Alison Tovar

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The Air that we Breathe: Neutral and volatile PFAS in Indoor Air, Maya E. Morales-McDevitt, Jitka Becanova, Arlene Blum, Thomas A. Bruton, Simon Vojta, Melissa Woodward, and Rainer Lohmann

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Poly- and Perfluorinated Alkyl Substances in Air and Water from Dhaka, Bangladesh, Maya E. Morales-McDevitt, Matthew Dunn, Ahsan Habib, Simon Vojta, Jitka Becanova, and Rainer Lohmann

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The Traveling Salesman Problem with Job-times (TSPJ), Mohsen Mosayebi, Manbir Sodhi, and Thomas A. Wettergren

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Different level automation technology acceptance: Older adult driver opinion, Sanaz Motamedi, Alaa Masrahi, Tobias Bopp, and Jyh Hone Wang

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Musical Chairs on Temperate Reefs: Species Turnover and Replacement Within Functional Groups Explain Regional Diversity Variation in Assemblages Associated With Honeycomb Worms, Alexandre Muller, Camille Poitrimol, Flávia L.D. Nunes, Aurélien Boyé, Amelia Curd, Nicolas Desroy, Louise B. Firth, Laura Bush, Andrew J. Davies, Fernando P. Lima, Martin P. Marzloff, Claudia Meneghesso, Rui Seabra, and Stanislas F. Dubois

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Emulating Target Trials to Improve Causal Inference From Agent-Based Models, Eleanor J. Murray, Brandon D.L. Marshall, and Ashley L. Buchanan

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The associations of Latino/a racial status and neighborhood discrimination to alcohol use and psychological distress, Tessa Nalven, Nichea S. Spillane, and Christina S. Lee

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Racial discrimination, racial identity affiliation, and heavy alcohol use among multiracial individuals, Tessa Nalven, Nichea S. Spillane, and Joseph S. Rossi

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Energetics of walking in individuals with cerebral palsy and typical development, across severity and age: A systematic review and meta-analysis, Mauro Nardon, Federico Ruzzante, Leslie O'Donnell, Alessandra Adami, Sudarshan Dayanidhi, and Matteo Bertucco

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Psychometric Evaluation of the Posttrauma Risky Behaviors Questionnaire: Item Response Theory Analyses, Prathiba Natesan Batley, Ateka A. Contractor, Nicole H. Weiss, Sidonia E. Compton, and Matthew Price

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Optimization of critical care pharmacy clinical services: A gap analysis approach, Andrea Sikora Newsome, Brian Murray, Susan E. Smith, Todd Brothers, Mohammad A. Al-Mamun, Aaron M. Chase, Sandra Rowe, Mitchell S. Buckley, David J. Murphy, and John W. Devlin

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Addressing Urgent Questions for PFAS in the 21st Century, Carla Ng, Ian T. Cousins, Jamie C. DeWitt, Juliane Glüge, Gretta Goldenman, Dorte Herzke, Rainer Lohmann, Mark Miller, Sharyle Patton, Martin Scheringer, Xenia Trier, and Zhanyun Wang

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Feasibility study for detection of retinal amyloid in clinical trials: The Anti-Amyloid Treatment in Asymptomatic Alzheimer's Disease (A4) trial, Jennifer Ngolab, Michael Donohue, Alison Belsha, Jennifer Salazar, Paula Cohen, Sandhya Jaiswal, Veasna Tan, Devon Gessert, Shaina Korouri, Neelum T. Aggarwal, Jessica Alber, Ken Johnson, Gregory Jicha, Christopher van Dyck, James Lah, Stephen Salloway, Reisa A. Sperling, Paul S. Aisen, Michael S. Rafii, and Robert A. Rissman

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Retaining Adolescent and Young Adult Participants in Research During a Pandemic: Best Practices From Two Large-Scale Developmental Neuroimaging Studies (NCANDA and ABCD), Kate B. Nooner, Tammy Chung, Sarah W. Feldstein Ewing, Ty Brumback, Zjanya Arwood, Susan F. Tapert, Sandra A. Brown, and Linda Cottler

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Behavioral and Demographic Responses of Mule Deer to Energy Development on Winter Range, Joseph M. Northrup, Charles R. Anderson Jr, Brian D. Gerber, and George Wittemyer

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Development, Implementation, and Impact of a Proning Team During the COVID-19 Intensive Care Unit Surge, Sharon C. O'Donoghue, Meghan Church, Kristin Russell, Kelly A. Gamboa, Jacqueline Hardman, Jennifer Sarge, Ari Moskowitz, Margaret M. Hayes, Michael N. Cocchi, and Susan DeSanto-Madeya

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Cloud shadows drive vertical migrations of deep-dwelling marine life, Melissa M. Omand, Deborah K. Steinberg, and Karen Stamieszkin

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The influence of environmental factors and fishing effort on demersal fish species in Ghanaian waters, Vida Samantha Osei, Graham E. Forrester, Michelle Naa Kordei Clottey, M. Connor McManus, and Jeremy Collie

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Program development using intervention mapping in primary healthcare settings to address elder abuse: A randomized controlled pilot study, Sonia Oveisi, Lynda A. Stein, Forozan Olfati, and Shima Jahed

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Hydrologic Regionalization under Data Scarcity: Implications for Streamflow Prediction, Jeeban Panthi, Rocky Talchabhadel, Ganesh R. Ghimire, Sanjib Sharma, Piyush Dahal, Rupesh Baniya, Thomas Boving, Soni M. Pradhanang, and Binod Parajuli

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The utility of household Grocery Purchase Quality Index scores as an individual diet quality metric, Haley Wynne Parker, Carolina De Araujo, Anne N. Thorndike, and Maya K. Vadiveloo

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Fine-scale morphological, genomic, reproductive, and symbiont differences delimit the Caribbean octocorals Plexaura homomalla and P. kükenthali, Jessie A. Pelosi, Moisés A. Bernal, Trevor J. Krabbenhoft, Samantha Galbo, Carlos Prada, Mary Alice Coffroth, and Howard Lasker

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Control of a Programmed Cell Death Pathway in Pseudomonas aeruginosa by an Antiterminator, Jennifer M. Peña, Samantha M. Prezioso, Kirsty A. McFarland, Tracy K. Kambara, Kathryn M. Ramsey, Padraig Deighan, and Simon L. Dove

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Impaired Host Response and the Presence of Acinetobacter baumannii in the Serum Microbiome of Type-II Diabetic Patients, Dasith Perera, Sarah E. Kleinstein, Benjamin Hanson, Hatice Hasturk, Ryan Eveloff, Marcelo Freire, and Matthew M. Ramsey

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3D Bioprinted Implants for Cartilage Repair in Intervertebral Discs and Knee Menisci, Kalindu Perera, Ryan Ivone, Evelina Natekin, Cheryl Wilga, Jie Shen, and Jyothi Menon

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La representación de la Idolatría en la comedia anónima: La aurora en el Occidente. Comedia famosa de la sagrada aparición de Nuestra Señora de Guadalupe, Ignacio Perez-Ibanez

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Reseña de Carlos Mata Induráin (ed.), «A dos luces, a dos visos». Calderón y el género sacramental en el Siglo de Oro, Ignacio Perez-Ibanez

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Women Readers and Writers in Medieval Iberia. Spinning the Text, Ignacio Perez-Ibanez

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Sobre los barcos de la vez, la vista en arpón y otros pasajes oscuros en los entremeses quevedianos, Ignacio Pérez-Ibàñez

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Hepatoprotective and anti-inflammatory effects of a standardized pomegranate (Punica granatum) fruit extract in high fat diet-induced obese C57BL/6 mice, Marisa Pfohl, Nicholas A. DaSilva, Emily Marques, Juliana Agudelo, Chang Liu, Michael Goedken, Angela L. Slitt, Navindra P. Seeram, and Hang Ma

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The Fiber Optic Reel System: A Compact Deployment Solution for Tethered Live-Telemetry Deep-Sea Robots and Sensors, Brennan T. Phillips, Nicholas Chaloux, Russell Shomberg, Adrjana Muñoz-Soto, and Jim Owens

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Microbiome Analysis Reveals Diversity and Function of Mollicutes Associated with the Eastern Oyster, Crassostrea virginica, Zachary T. Pimentel, Keith Dufault-Thompson, Kayla T. Russo, Abigail K. Scro, Roxanna M. Smolowitz, Marta Gomez-Chiarri, and Ying Zhang

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Value-based payment what does it mean for nurses?, Patricia Pittman, Betty Rambur, Susan Birch, Garrett K. Chan, Cindy Cooke, Mollie Cummins, Colleen Leners, Lisa Kane Low, Mikki Meadows-Oliver, Mona Shattell, Cheryl Taylor, and Deborah Trautman

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Student Loan Decision Making: Experience as an Anchor, Nilton Porto, Soo Hyun Cho, and Michael Gutter

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An inexpensive, 3D-printable breast muscle meter for field ornithologists, Luke L. Powell, Adam Metallo, Crinan Jarrett, Nathan W. Cooper, Peter P. Marra, Scott R. McWilliams, Ulf Bauchinger, and Bryant C. Dossman

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Peter F. Merenda (1922-2019), James Prochaska

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Avenues of reef-building coral acclimatization in response to rapid environmental change, Hollie M. Putnam

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Sequence Dependent Repair of 1,N6-Ethenoadenine by DNA Repair Enzymes ALKBH2, ALKBH3, and AlkB, Rui Qi, Ke Bian, Fangyi Chen, Qi Tang, Xianhao Zhou, and Deyu Li

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Reply to: Shark mortality cannot be assessed by fishery overlap alone, Nuno Queiroz, Nicolas E. Humphries, Ana Couto, Marisa Vedor, Ivo da Costa, Ana M.M. Sequeira, Gonzalo Mucientes, António M. Santos, Francisco J. Abascal, Debra L. Abercrombie, Katya Abrantes, David Acuña-Marrero, André S. Afonso, Pedro Afonso, Darrell Anders, Gonzalo Araujo, Randall Arauz, Pascal Bach, Adam Barnett, Diego Bernal, Michael L. Berumen, Sandra Bessudo Lion, Natalia P.A. Bezerra, Antonin V. Blaison, Barbara A. Block, Mark E. Bond, Ramon Bonfil, Russell W. Bradford, and Camrin D. Braun

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Reply to: Caution over the use of ecological big data for conservation, Nuno Queiroz, Nicolas E. Humphries, Ana Couto, Marisa Vedor, Ivo da Costa, Ana M.M. Sequeira, Gonzalo Mucientes, António M. Santos, Francisco J. Abascal, Debra L. Abercrombie, Katya Abrantes, David Acuña-Marrero, André S. Afonso, Pedro Afonso, Darrell Anders, Gonzalo Araujo, Randall Arauz, Pascal Bach, Adam Barnett, Diego Bernal, Michael L. Berumen, Sandra Bessudo Lion, Natalia P.A. Bezerra, Antonin V. Blaison, Barbara A. Block, Mark E. Bond, Ramon Bonfil, Camrin D. Braun, and Edward J. Brooks

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Using reinforcement learning for tuning genetic algorithms, Jose Quevedo, Marwan Abdelatti, Farhad Imani, and Manbir Sodhi

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Coral reef resilience differs among islands within the Gulf of Mannar, southeast India, following successive coral bleaching events, K. Diraviya Raj, Greta S. Aeby, G. Mathews, Gareth J. Williams, Jamie M. Caldwell, R. L. Laju, M. Selva Bharath, P. Dinesh Kumar, A. Arasamuthu, N. Gladwin Gnana Asir, Lisa M. Wedding, Andrew J. Davies, Monica M. Moritsch, and J. K. Patterson Edward

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Meta-analysis of primary producer amino acid δ15N values and their influence on trophic position estimation, Matthew D. Ramirez, Alexi C. Besser, Seth D. Newsome, and Kelton McMahon

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Hepatotoxicity reports in the FDA adverse event reporting system database: A comparison of drugs that cause injury via mitochondrial or other mechanisms, Payal Rana, Michael D. Aleo, Xuerong Wen, and Stephen Jon Kogut

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KBART Phase III: Unresolved questions, Andrée Rathemacher

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Positive Emotion Dysregulation Identifies Trauma-Exposed Community Individuals at Risk for Suicide and Nonsuicidal Self-Injury, Alexa M. Raudales, Angela G. Darosh, Ateka A. Contractor, Heather T. Schatten, Katherine L. Dixon-Gordon, and Nicole H. Weiss

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Positive emotion dysregulation and posttraumatic stress disorder symptoms: Investigating the role of anxiety sensitivity, Alexa M. Raudales, Reina Kiefer, Shannon R. Forkus, Ateka A. Contractor, and Nicole H. Weiss

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The role of emotion dysregulation in the association between posttraumatic stress disorder symptoms and suicidal thoughts and behaviors among veterans, Alexa M. Raudales, Nicole H. Weiss, Katherine L. Dixon-Gordon, Ateka A. Contractor, and Heather T. Schatten

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Optimal Signal Design for a New Physically Motivated Clutter Model with Applications to Ultrasonic Testing, Yazan Rawashdeh and Steven Kay

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Overstraining Human Nature in the Nicomachean Ethics, Douglass Reed

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Free-Standing, Thin-Film Sensors for the Trace Detection of Explosives, Peter P. Ricci and Otto J. Gregory

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Sensors for the Detection of Ammonia as a Potential Biomarker for Health Screening, Peter P. Ricci and Otto J. Gregory

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Impact of chronic stylet-feeder infestation on folivore-induced signaling and defenses in a conifer, Chad M. Rigsby, Mélanie J.A. Body, Amelia May, Anita Oppong, Amy Kostka, Nick Houseman, Suzanne Savage, Elizabeth R. Whitney, Ian G. Kinahan, Brenton Deboef, Colin M. Orians, Heidi M. Appel, Jack C. Schultz, and Evan L. Preisser

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Intranasal Ketamine for Acute Pain, Robert J. Rocchio and Kristina E. Ward

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Transcriptional regulation of plant biomass degradation and carbohydrate utilization genes in the extreme thermophile caldicellulosiruptor bescii, Dmitry A. Rodionov, Irina A. Rodionova, Vladimir A. Rodionov, Aleksandr A. Arzamasov, Ke Zhang, Gabriel M. Rubinstein, Tania N.N. Tanwee, Ryan G. Bing, James R. Crosby, Intawat Nookaew, Mirko Basen, Steven D. Brown, Charlotte M. Wilson, Dawn M. Klingeman, Farris L. Poole, Ying Zhang, Robert M. Kelly, and Michael W.W. Adams

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Prescriber and pharmacist understanding of revised Rhode Island pain management regulations, Britny G. Rogala, Alexandria Jarvais, Taylor Ng, and Jeffrey Bratberg

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Applying model approaches in non-model systems: A review and case study on coral cell culture, Liza M. Roger, Hannah G. Reich, Evan Lawrence, Shuaifeng Li, Whitney Vizgaudis, Nathan Brenner, Lokender Kumar, Judith Klein-Seetharaman, Jinkyu Yang, Hollie M. Putnam, and Nastassja A. Lewinski

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All internships are not created equal: Job design, satisfaction, and vocational development in paid and unpaid internships, Sean Edmund Rogers, Carliss D. Miller, Carol Flinchbaugh, Mark Giddarie, and Brian Barker

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Abiotic soil properties affecting interpretation of IRIS sensors in tidal and freshwater soils, Jasper Romero, Katelyn Hino, Joseph Loffredo, Mark Stolt, Serena Moseman-Valtierra, Jose Amador, and Brett Pellock

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Anti-neuroinflammatory effects of a food-grade phenolic-enriched maple syrup extract in a mouse model of Alzheimer’s disease, Kenneth N. Rose, Benjamin J. Barlock, Nicholas A. DaSilva, Shelby L. Johnson, Chang Liu, Hang Ma, Robert Nelson, Fatemeh Akhlaghi, and Navindra P. Seeram

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On Rates of Isopycnal Dispersion at the Submesoscale, T. Rossby, M. Omand, J. Palter, and D. Hebert

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Decoding lessons from the Facebook Consent Decree: Does Sarbanes–Oxley foreshadow the future of privacy regulation?, Patrick M. Ryle, Brett L. Bueltel, Mark A. McKnight, and Judy K. Beckman

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An adaptive behavioral immune system: a model of population health behavior, Julian M. Saad and James O. Prochaska

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The Fueling Learning Through Exercise Study Cluster RCT: Impact on Children's Moderate-to-Vigorous Physical Activity, Jennifer M. Sacheck, Catherine M. Wright, Sarah A. Amin, Stephanie Anzman-Frasca, Virginia M. Chomitz, Kenneth K. Chui, Paula J. Duquesnay, Miriam E. Nelson, and Christina D. Economos

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A Wearable Optical Microfibrous Biomaterial with Encapsulated Nanosensors Enables Wireless Monitoring of Oxidative Stress, Mohammad Moein Safaee, Mitchell Gravely, and Daniel Roxbury

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The Validation of a Portable Functional NIRS System for Assessing Mental Workload, Manob Jyoti Saikia, Walter Besio, and Kunal Mankodiya

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Gregarine single-cell transcriptomics reveals differential mitochondrial remodeling and adaptation in apicomplexans, Eric D. Salomaki, Kristina X. Terpis, Sonja Rueckert, Michael Kotyk, Zuzana Kotyková Varadínová, Ivan Čepička, Christopher E. Lane, and Martin Kolisko

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Surviving Heatwaves: Thermal Experience Predicts Life and Death in a Southern Ocean Diatom, Toby Samuels, Tatiana A. Rynearson, and Sinéad Collins

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Mesophotic Gorgonian Corals Evolved Multiple Times and Faster Than Deep and Shallow Lineages, Juan A. Sánchez, Fanny L. González-Zapata, Carlos Prada, and Luisa F. Dueñas

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Exploring the Three Dimensions of Sustainability Related to Clay Cups, Kuldip Singh Sangwan, Manbir Sodhi, Thomas Spengler, and Christian Thies

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Identifying patient-level factors associated with interest in psychosocial services during cancer: A brief report, Timothy S. Sannes, William F. Pirl, Joseph S. Rossi, Lawrence Grebstein, Colleen A. Redding, Ginette G. Ferszt, James O. Prochaska, Ilana M. Braun, and Miryam Yusufov

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Transcranial Focal Electrical Stimulation Modifies Biogenic Amines’ Alterations Induced by 6-Hydroxydopamine in Rat Brain, Cesar Emmanuel Santana-Gómez, Daniel Pérez-Pérez, Daniel Fonseca-Barriendos, Oscar Arias-Carrión, Walter Besio, and Luis Rocha

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The Contribution of Water Radiolysis to Marine Sedimentary Life, Justine F. Sauvage, Ashton Flinders, Arthur J. Spivack, Robert Pockalny, Ann G. Dunlea, Chloe H. Anderson, David C. Smith, Richard W. Murray, and Steven D'Hondt

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Disease-driven Reduction in Human Mobility Influences Human-Mosquito Contacts and Dengue Transmission Dynamics, Kathryn L. Schaber, T. Alex Perkins, Alun L. Lloyd, Lance A. Waller, Uriel Kitron, Valerie A. Paz-Soldan, John P. Elder, Alan L. Rothman, David J. Civitello, William H. Elson, Amy C. Morrison, Thomas W. Scott, and Gonzalo M. Vazquez-Prokopec

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Social Reactions to IPV Disclosure and PTSD Symptom Severity: Assessing Avoidant Coping as a Mediator, Jennifer N. Schackner, Nicole H. Weiss, Katie M. Edwards, and Tami P. Sullivan

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New High-Resolution Modeling of the 2018 Palu Tsunami, Based on Supershear Earthquake Mechanisms and Mapped Coastal Landslides, Supports a Dual Source, Lauren Schambach, Stephan Grilli, and David R. Tappin

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Alcohol- and drug-related consequences across latent classes of substance use among American Indian adolescents, Melissa R. Schick, Silvi C. Goldstein, Tessa Nalven, and Nichea S. Spillane

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A Framework for the Adaptation of Positive Psychological Interventions to North American Indigenous Populations, Melissa R. Schick, Katelyn T. Kirk-Provencher, Silvi C. Goldstein, Tessa Nalven, and Nichea S. Spillane

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Positive emotional intensity and substance use: the underlying role of positive emotional avoidance in a community sample of military veterans, Melissa R. Schick, Nicole H. Weiss, Ateka C. Contractor, Emmanual D. Thomas, and Nichea S. Spillane

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Risk factors associated with alcohol and drug use among bisexual women: A literature review., Christina T. Schulz, Emily M. Glatt, and Amy L. Stamates

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Genetic and physiological traits conferring tolerance to ocean acidification in mesophotic corals, Federica Scucchia, Assaf Malik, Hollie M. Putnam, and Tali Mass

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Combined responses of primary coral polyps and their algal endosymbionts to decreasing seawater pH, Federica Scucchia, Assaf Malik, Paul Zaslansky, Hollie M. Putnam, and Tali Mass

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Asian Americans’ mental health help-seeking attitudes: The relative and unique roles of cultural values and ethnic identity., Mehwish Shahid, Nicole H. Weiss, Gary Stoner, and Bryan Dewsbury

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Challenges in Evaluating Safety and Efficacy in Drug Development for Rare Diseases: A Review for Pharmacists, Kanya K. Shah, Stephen Kogut, and Angela Slitt

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A quasi-experimental study to improve health service quality: implementing communication and self-efficacy skills training to primary healthcare workers in two counties in Iran, Hossein Shahnazi, Marzieh Araban, Mahmood Karimy, Mansooreh Basiri, Ali Ghazvini, and L. A.R. Stein

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The effects of multiple-period promotions differing in frequency and depth on internal reference price, Daniel A. Sheinin and Albert J. Della Bitta

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Frequency Restoration and Oscillation Damping of Distributed VSGs in Microgrid with Low Bandwidth Communication, Mengxuan Shi, Xia Chen, Jianyu Zhou, Yin Chen, Jinyu Wen, and Haibo He

An Ecological Assessment of Critically Endangered Chinese Pangolin Manis pentadactyla (Mammalia: Pholidota: Manidae) in the Midhills Region of Nepal, Sandeep Shrestha, Ashish Bashyal, Rojeena Rijal, Janam Shrestha, Palistha Shrestha, Nischal Shrestha, Thomas J. McGreevy Jr., Bill Buffum, and Sanjay Nath Khanal

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Online Scheduling of a Residential Microgrid via Monte-Carlo Tree Search and a Learned Model, Hang Shuai and Haibo He

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COVID-19 and influenza vaccine hesitancy among college students, Jessica Silva, Jeffrey Bratberg, and Virginia Lemay

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Development and Application of STORMTOOLS Design Load (SDL) Maps, Isabella Silverman, Blaze Engelman, Alexa Leone, Michael Rothenbucher, Allison Munch, Joseph Sorrentino, Brandon Markiewicz, Chris Pearson, Christopher Baxter, Craig Swanson, George Tiastas, and Malcolm Spaulding

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A Survey of Spontaneous Antibiotic-Resistant Mutants of the Halophilic, Thermophilic Bacterium Rhodothermus marinus, Sophia Silvia, Samantha A. Donahue, Erin E. Killeavy, Gerwald Jogi, and Steven T. Gregory

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Intimate Partner Violence and Posttraumatic Stress Symptoms: Indirect Effects Through Negative and Positive Emotion Dysregulation, Lauren E. Simpson, Alexa M. Raudales, Miranda E. Reyes, Tami P. Sullivan, and Nicole H. Weiss

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Prevalence and Factors Associated with School and Cyberbullying Among Rhode Island Youth, Dorothy Skierkowski-Foster

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Beyond Subculture the Meaning of Style: Chronicling Directions of Scholarship on Dress since Hebdige and Muggleton, Monica Sklar, Jessica Strübel, Katharine Freiberg, and Sara Elhabbassi

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Pursuing Collective Synchrony in Teams: A Regime-Switching Dynamic Factor Model of Speed Similarity in Soccer, Daniel M. Smith and Theodore A. Walls

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Pursuing Collective Synchrony in Teams: A Regime-Switching Dynamic Factor Model of Speed Similarity in Soccer, Daniel M. Smith and Theodore A. Walls

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Dynamics of Flexible Viruses in Polymer Solutions, Maxwell Smith, Ryan Poling-Skutvik, Ali H. Slim, Richard C. Willson, and Jacinta C. Conrad