All URI faculty publications that are in DigitalCommons@URI are listed here. This includes journal article articles that were deposited under the URI Open Access Policy, as well as other articles that were deposited according to journal policies.

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Submissions from 2018

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T cell epitope engineering: an avian H7N9 influenza vaccine strategy for pandemic preparedness and response, Leonard Moise, Bethany M. Biron, Christine M. Boyle, Nese Kurt Yilmaz, Hyesun Jang, Celia Schiffer, Ted M. Ross, William D. Martin, and Anne S. De Groot

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Nonlinear optical susceptibility of atomically thin WX2 crystals, Mohammad Mokim, Adam Card, and Feruz Ganikhanov

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Climate change impacts on critical international transportation assets of Caribbean Small Island Developing States (SIDS): the case of Jamaica and Saint Lucia, Isavela N. Monioudi, Regina Asariotis, Austin Becker, Cassandra Bhat, Danielle Dowding-Gooden, Miguel Esteban, Luc Feyen, Lorenzo Mentaschi, Antigoni Nikolaou, Leonard Nurse, Willard Phillips, David A-Y Smith, Mizushi Satoh, Ulric O'Donnell Trotz, Adonis F. Velegrakis, Evangelos Voukouvalas, Michalis I. Vousdoukas, and Robert Witkop

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Selling Anthropocene space: situated adventures in sustainable tourism, Amelia Moore

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Meeting Mentoring Needs in Physical Oceanography: An Evaluation of the Impact of MPOWIR, Colleen B. Mouw, Sarah Clem, Sonya Legg, and Jean Stockard

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Satellite sensor requirements for monitoring essential biodiversity variables of coastal ecosystems, Frank E. Muller-Karger, Colleen B. Mouw, and et al

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Sustainable Transportation and Health, Norbert Mundorf, Colleen Redding, and Songtao Bao

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Sustainable Transportation Attitudes and Health Behavior Change: Evaluation of a Brief Stage-Targeted Video Intervention, Norbert Mundorf, Colleen Redding, and Andrea L. Paiva

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Port Decision Maker Perceptions on the Effectiveness of Climate Adaptation Actions, Adolf K.Y. Ng, Huiying Zhang, Mawuli Afenyo, Austin Becker, Stephen Cahoon, Shu-ling Chen, Miguel Esteban, Claudio Ferrari, Yui-yip Lau, Paul Tae-Woo Lee, Jason Monios, Alessio Tei, Zaili Yang, and Michele Acciaro

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Development of Electrolytes for Si-Graphite Composite Electrodes, Cao Cuong Nguyen and Brett L. Lucht

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A Comment on Priors for Bayesian Occupancy Models, Joseph Northrup and Brian D. Gerber

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These aren’t the loci you’re looking for: Principles of effective SNP filtering for molecular ecologists, Shannon J. O'Leary, Jonathan B. Puritz, Stuar C. Willis, Christopher M. Hollenbeck, and David S. Portnoy

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A dark side of long-term VMI relationships: supply chain trust, Koray Özpolat and Martin Dresner

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Tell Me What You Want: Collective Bargaining for Adjunct Faculty, Kimberly Page

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Nephromyces Encodes a Urate Metabolism Pathway and Predicted Peroxisomes, Demonstrating These Are Not Ancient Losses of Apicomplexans, Christopher Paight, Claudio H. Slamovits, Mary Beth Saffo, and Christopher E. Lane

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Climate, ocean circulation, and sea level changes under stabilization and overshoot pathways to 1.5 K warming, Jaime B. Palter, Thomas L. Frölicher, David Paynter, and Jasmin G. John

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Climate, Ocean Circulation, and Sea Level Changes under Stabilization and Overshoot Pathways to 1.5 K Warming, Jaime B. Palter, Thomas L. Frölicher, David Paynter, and Jasmin G. John

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The Sensitivity of Future Ocean Oxygen to Changes in Ocean Circulation, Jaime B. Palter and David S. Trossman

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Reduction Reactions of Electrolyte Salts for Lithium Ion Batteries: LiPF6, LiBF4, LiDFOB, LiBOB, and LiTFSI, Bharathy S. Parimalam and Brett L. Lucht

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Surface currents from hourly variations of suspended particulate matter from Geostationary Ocean Color Imager data, Kyung-Ae Park, Min-Sun Lee, Ji-Eun Park, David Ullman, Peter C. Cornillon, and Young-Je Park

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Use of structural equation models to predict dengue illness phenotype, Sangshin Park, Anon Srikiatkhachorn, Siripen Kalayanarooj, Louis Macareo, Sharone Green, Jennifer F. Friedman, and Alan L. Rothman

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Rx for addiction and medication safety: An evaluation of teen education for opioid misuse prevention, Emily Patry, Jeffrey P. Bratberg, Ashley L. Buchanan, Andrea L. Paiva, Sara Balestrieri, and Kelly L. Matson

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Biodiversity Assessments: Origin Matters, Aníbal Pauchard, Laura A. Meyerson, Sven Bacher, Tim M. Blackburn, Giuseppe Brundu, Marc W. Cadotte, Franck Courchamp, Franz Essl, Piero Genovesi, Sylvia Haider, Nick D. Holmes, Philip E. Hulme, Jonathan M. Jeschke, Julie L. Lockwood, Ana Novoa, Martin A. Nuñez, Duane A. Peltzer, Petr Pyšek, David M. Richardson, Daniel Simberloff, Kevin Smith, Brian W. van Wilgen, Montserrat Vilà, John R. U. Wilson, Marten Winter, and Rafael D. Zenni

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Improved survival with continuation of statins in bacteremic patients, Ajinkta M. Pawar, Kerry L. LaPlante, Tristan T. Timbrook, and Aisling R. Caffrey

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Optimal Duration for Continuation of Statin Therapy in Bacteremic Patients, Ajinkya M. Pawar, Kerry L. LaPlante, Tristan T. Timbrook, and Aisling R. Caffrey

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Dewey’s Thought on Education and Social Change, Ignacio Perez-Ibanez

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Are We Reading Russia Right?, Nicolai Petro

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How the West Lost Russia: Explaining the Conservative Turn in Russian Foreign Policy, Nicolai N. Petro

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A Dexterous, Glove-Based Teleoperable Low-Power Soft Robotic Arm for Delicate Deep-Sea Biological Exploration, Brennan Phillips, Kaitlyn P. Becker, Shunichi Kurumaya, Kevin C. Galloway, Griffin Whittredge, Daniel M. Vogt, Clark B. Teeple, Michelle H. Rosen, Vincent A. Pieribone, David F. Gruber, and Robert J. Wood

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River-discharge Effects on United States Atlantic and Gulf Coast Sea-level Changes, Christopher G. Piecuch, Klaus Bittermann, Andrew C. Kemp, Rui M. Ponte, Christopher M. Little, Simon E. Engelhart, and Steven J. Lentz

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Evolution of the Natural Transformation Protein, ComEC, in Bacteria, Zachary T. Pimentel and Ying Zhang

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A Method to Develop Vocabulary Checklists in New Languages and their Validity to Assess Early Language Development, Elizabeth L. Prado, John Phuka, Eugenia Ocansey, Kenneth Maleta, Per Ashorn, Ulla Ashorn, Seth Adu-Afarwuah, Brietta M. Oaks, Anna Lartey, and Kathryn G. Dewey

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The Individual Determinants of Support for Open Space Bond Referendums, Patrick Prendergast, Shanna Pearson-Merkowitz, and Corey Lang

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Class Debates in Intermediate Microeconomics: Social Economics and Pluralist Perspectives, Ashley J. Provencher and Smita Ramnarain

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Expressed Exome Capture Sequencing (EecSeq): a method for cost-effective exome sequencing for all organisms, Jonathan B. Puritz and Katie E. Lotterhos

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Small Genome Separates Native and Invasive Populations in an Ecologically Important Cosmopolitan Grass, Petr Pyšek, Hana Skálová, Jan Čuda, Wen-Yong Guo, Jan Suda, Jan Doležal, Ondřej Kauzál, Carla Lambertini, Magdalena Lučanová, Terezie Mandáková, Lenka Moravcová, Klára Pyšková, Hans Brix, and Laura A. Meyerson

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Minimal Influence of Extracellular DNA on Molecular Surveys of Marine Sedimentary Communities, Gustavo A. Ramírez, Steffen L. Jørgensen, Rui Zhao, and Steven D’Hondt

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Influence of Commercial DNA Extraction Kit Choice on Prokaryotic Community Metrics in Marine Sediment, Gustavo Ramirez, Dennis Graham, and Steven D’Hondt

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Draft Genome Sequence of Loktanella Maritima Strain YPC211, a Commensal Bacterium of the American Lobster (Homarus Americanus), Hilary J. Ranson, Jason LaPorte, Edward Spinard, Marta Gomez-Chiarri, David R. Nelson, and David C. Rowley

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Draft Genome Sequence of the Putative Marine Pathogen Aquimarina sp. Strain I32.4, Hilary J. Ranson, Edward Spinard, Andrei Y. Chistoserdov, Marta Gomez-Chiarri, David R. Nelson, and David C. Rowley

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A New Biological Proxy for Deep-Sea Paleo-Oxygen: Pores of Epifaunal Benthic Foraminifera, Anthony E. Rathburn, Jake Willingham, Wiebke Ziebis, Ashley M. Burkett, and Bruce H. Corliss

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Open Licensing with Creative Commons, Andrée Rathemacher

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Understanding the Relationship between Food Variety, Food Intake, and Energy Balance, Hollie A. Raynor and Maya Vadiveloo

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Decoration of Nanovesicles with pH (Low) Insertion Peptide (pHLIP) for Targeted Delivery, Federica Rinaldi, Patrizia N. Hanieh, Elena Del Favero, Valeria Rondelli, Paola Brocca, Mohan C. Pereira, Oleg A. Andreev, Yana K. Reshetnyak, Carlotta Marianecci, and Maria Carafa

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Cellulose Microfibril Structure: Inspirations from Plant Diversity, Alison Roberts

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The Effects of Volume Versus Intensity of Long-Term Voluntary Exercise on Physiology and Behavior in C57/Bl6 Mice, Lisa S. Robison, Dominique L. Popescu, Maria E. Anderson, Steven I. Beigelman, Shannon M. Fitzgerald, Antonina E. Kuzmina, David A. Lituma, Sarima Subzwari, Michalis Michaelos, Brenda J. Anderson, William E. Van Nostrand, and John K. Robinson

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A multiscale approach to balance trade-offs among dam infrastructure, river restoration, and cost, Samuel G. Roy, Emi Uchida, Simone P. de Souza, Ben Blachly, Emma Fox, Kevin Gardner, Arthur Gold, Jessica Jansujwicz, Sharon Klein, Bridie McGreavy, Weiwei Mo, Sean M.C. Smith, Emily Vogler, Karen Wilson, Joseph Zydlewski, and David Hart

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Concentrations, Trends, and Air–Water Exchange of PCBs and Organochlorine Pesticides Derived from Passive Samplers in Lake Superior in 2011, Zoe Ruge, Derek Muir, Paul Helm, and Rainer Lohmann

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Atezolizumab for the First-Line Treatment of Non-small Cell Lung Cancer (NSCLC): Current Status and Future Prospects, Rachel Ryu and Kristina E. Ward

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WearLight: Towards a Wearable, Configurable Functional NIR Spectroscopy System for Noninvasive Neuroimaging, Manob Jyoti Saikia, Walter G. Besio, and Kunal Mankodiya

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Connections between Identity, Attachment, and Psychological Dating Aggression during Adolescence, Hans Saint-Eloi Cadely, Jennifer L. Kerpelman, and Joe F. Pittman

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Predicting Patterns of Intimate Partner Violence Perpetration from Late Adolescence to Young Adulthood, Hans Saint-Eloi Cadely, Joe F. Pittman, Gregory S. Pettit, Jennifer E. Lansford, John E. Bates, Kenneth A. Dodge, and Amy Holtzworth-Munroe

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Deep-sea hydrothermal vents as natural egg-case incubators at the Galapagos Rift, Pelayo Salinas-de-León, Brennan Phillips, David Ebert, Mahmood Shivji, Florencia Cerutti-Pereyra, Cassandra Ruck, Charles R. Fisher, and Leigh Marsh

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Cellulose synthase ‘class specific regions’ are intrinsically disordered and functionally undifferentiated, Tess R. Scavuzzo-Duggan, Arielle M. Chaves, Abhishek Singh, Latsavongsakda Sethaphong, Erin Slabaugh, Yaroslava G. Yingling, Candace H. Haigler, and Alison Roberts

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Decimation by sea star wasting disease and rapid genetic change in a keystone species, Pisaster ochraceus, Lauren A. Schiebelhut, Jonathan B. Puritz, and Michael N. Dawson

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Energy Consumption Estimation for Routing EVs based on Driver Behavior, Niklas Schwertner and Gretchen Macht

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Communication Barriers and Lessons Learned in Energy Policy, Hollie Smith and Christine Gilbert

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The Social Dynamics of Turbine Tourism and Recreation: Introducing a mixed-method approach to the study of the First U.S. Offshore Wind Farm, Hollie Smith, Tiffany Smythe, Amelia Moore, David Bidwell, and Jennifter McCann

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FindPrimaryPairs: An Efficient Algorithm for Predicting Element-Transferring Reactant/Product Pairs in Metabolic Networks, Jon Lund Steffensen, Keith M. Dufault-Thompson, and Ying Zhang

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Real-Time Chronological Hazard Impact Modeling, Peter Stempel, Isaac Ginis, David S. Ullman, Austin Becker, and Robert Witkop

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Effectiveness of a multivitamin supplementation program among HIV-infected adults in Tanzania, Christopher R. Sudfeld, Ashley L. Buchanan, Nzovu Ulenga, Donna Spiegelman, Expeditho Mtisi, Ellen Hertzmark, Aisa N. Muya, David Sando, Ester Mungure, Mucho Mizinduko, and Wafaie W. Fawzi

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Prospect Theory and Tenure Reform: Impacts on Forest Management, Karen A. Sullivan, Emi Uchida, Thomas W. Sproul, and Jintao Xu

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Nicotinamide complex of silver(III) with expanded coordination number, Yunfu Sun and Louis J. Kirschenbaum

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The Use of Bearing Measurements for Detecting GNSS Spoofing, Peter F. Swaszek, Richard J. Hartnett, and Kelly C. Seals

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Limits on GNSS Performance at High Latitudes, Peter F. Swaszek, Richard J. Hartnett, Kelly C. Seals, Joseph D. Siciliano, and Rebecca M. A. Swaszek

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Perceptions of Commercial and Recreational Fishers on the Potential Ecological Impacts of the Block Island Wind Farm (US), Talya S. ten Brink and Tracey Dalton

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Feeding island dreams: exploring the relationship between food security and agritourism in the Caribbean, Adelle Thomas, Amelia Moore, and Michael Edwards

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A Review of Tunable Wavelength Selectivity of Metamaterials in Near-Field and Far-Field Radiative Thermal Transport, Yanpei Tian, Alok Ghanekar, Matt Ricci, Mikhail Hyde, Otto J. Gregory, and Yi Zheng

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1238. A National Comparison of Antibiograms Between Veterans Affairs Long-Term Care Facilities and Affiliated Hospitals, Maria-Stephanie Tolg, Aisling R. Caffrey, Haley Appaneal, Robin Jump, Vrishali Lopes, David Dosa, and Kerry L. LaPlante

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1437. Family Duty and Safety Linked to Overcoming Attitudinal Barriers to Adult Pneumococcal Vaccination in Disparate Populations, Maria-Stephanie Tolg, Marc L. Hutchison, Brian Krueger, Katherine Kelly Orr, Jennifer M. DeAngelis, Aisling R. Caffrey, and Kerry L. LaPlante

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A Magnetically Responsive Biomaterial System for Flexibly Regulating the Duration Between Pro- and Anti-Inflammatory Cytokine Deliveries, Anita E. Tolouei, Nihan Dügler, Rosa Ghatee, and Stephen Kennedy

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Nutritional Quality of Meals and Snacks Served and Consumed in Family Child Care, Alison Tovar, Sara E. Benjamin-Neelon, Amber E. Vaughn, Maggie Tsai, Regan Burney, Truls Østbye, and Dianne S. Ward

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Direct observation of the effects of cellulose synthesis inhibitors using live cell imaging of Cellulose Synthase (CESA) in Physcomitrella patens, Mai L. Tran, Thomas W. McCarthy, Hao Sun, Shu-Zon Wu, Joanna H. Norris, Magdalena Bezanilla, Luis Vidali, Charles T. Anderson, and Alison W. Roberts

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Measurement of Formic Acid, Acetic Acid and Hydroxyacetaldehyde, Hydrogen Peroxide, and Methyl Peroxide in Air by Chemical Ionization Mass Spectrometry: Airborne Method, Victoria Treadaway, Brian G. Heike, Ashley S. McNeill, Indira K. C. Silwal, and Daniel W. O'Sullivan

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Lead-Free Solder Pull-Off Stress Comparison of a Novel Bump Pull Method with Conventional Hot/Cold Bump Pull Methods, Gregory A. Turner and D.M.L. Meyer

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Methane-Oxidizing Seawater Microbial Communities from an Arctic Shelf, C. Uhlig, J. B. Kirkpatrick, Steven L. D'Hondt, and Brice Loose

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Health Studies Program Newsletter for 2018, URI Health Studies Program

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Teaching intersectionality: Pedagogical approaches for lasting impact, Melissa Villa-Nicholas

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Terror by Telephone: Normative Anxieties around Obscene Calls in the 1960s, Melissa Villa-Nicholas

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Transboundary Cooperation Improves Endangered Species Monitoring and Conservation Actions: A Case Study of the Global Population of Amur Leopards, Anna Vitkalova, Limin Feng, Alexander N. Rybin, Brian D. Gerber, Dale G. Miquelle, Tianming Wang, Haitao Yang, Elena I. Shevtsova, Vladimir V. Aramilev, and Jianping Ge

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Shipboard Design and Fabrication of Custom 3D-printed Soft Robotic Manipulators for the Investigation of delicate Deep-sea Organisms, Daniel M. Vogt, Kaitlyn P. Becker, Brennan Phillips, Moritz A. Graule, Randi D. Rotjan, Timothy M. Shank, Erik E. Cordes, Robert J. Wood, and David F. Gruber

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Addendum: Comparative Genomic Analysis of the Class Epsilonproteobacteria and Proposed Reclassification to Epsilonbacteraeota (phyl. nov.), David W. Waite, Inka Vanwonterghem, Christian Rinke, Donovan H. Parks, Ying Zhang, Ken Takai, Stefan M. Sievert, Jörg Simon, Barbara J. Campbell, Thomas E. Hanson, Tanja Woyke, Martin G. Klotz, and Philip Hugenholtz

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Concentrations of Multiple Phytoplankton Pigments in the Global Oceans Obtained from Satellite Ocean Color Measurements with MERIS, Guoqing Wang, Zhongping Lee, and Colleen B. Mouw

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Remote Sensing of Floodpath Lakes and Wetlands: A Challenging Frontier in the Monitoring of Changing Environments, Yeqiao Wang and Hervé Yésou

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The Fallacies of Open: Participatory Design, Infrastructuring, and the Pursuit of Radical Possibility, Stephanie West-Puckett, Anna Smith, Christina Cantrill, and Mia Zamora

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Neurocognitive, Autonomic, and Mood Effects of Adderall: A Pilot Study of Healthy College Students, Lisa L. Weyandt, Tara L. White, Bergljot Gyda Gudmundsdottir, Adam Z. Nitenson, Emma S. Rathkey, Kelvin A. De Leon, and Stephanie A. Bjorn

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Sensitivity to near-future CO2 conditions in marine crabs depends on their compensatory capacities for salinity change, Nia M. Whiteley, Coleen Suckling, Benjamin J. Ciotti, James Brown, Ian D. McCarthy, Luis Gimenez, and Chris Hauton

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Amino acid isotope discrimination factors for a carnivore: physiological insights from leopard sharks and their diet, John P. Whiteman, Sora L. Kim, Kelton W. McMahon, Paul L. Koch, and Seth D. Newsome

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Impact of skeletal heterogeneity and treatment method on interpretation of environmental variability from the proteinaceous skeletons of deep-sea gorgonian octocorals, Branwen Williams, Kelton McMahon, Sarah Barnes, Devyn Parks, Ella Kim, Tanja Srebotnjak, and Peter Etnoyer

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Chronic impacts of invasive herbivores on a foundational forest species: a whole‐tree perspective, Claire M. Wilson, Robert N. Schaeffer, Mauri L. Hickin, Chad M. Rigsby, Amanda F. Sommi, Carol S. Thornber, Colin M. Orians, and Evan L. Preisser

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Ocean deoxygenation and zooplankton: Very small oxygen differences matter, Karen F. Wishner, B. A. Seibel, Christopher Roman, C. Deutsch, Dawn Outram, C. T. Shaw, M. A. Birk, K. A.S. Mislan, T. J. Adams, D. Moore, and S. Riley

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Ocean Deoxygenation and Zooplankton: Very Small Oxygen Differences Matter, Karen F. Wishner, Brad A. Seibel, Christopher Roman, C. Deutsch, Dawn Outram, C. T. Shaw, M. A. Birk, K. A. S. Mislan, T. J. Adams, D. Moore, and S. Riley

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Bayesian Modeling and Inference for Nonignorably Missing Longitudinal Binary Response Data with Applications to HIV Prevention Trials, Jing Wu, Joseph G. Ibrahim, Minghui Chen, Elizabeth D. Schifano, and Jeffrey David Fisher

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Albisporachelin, a New Hydroxamate Type Siderophore from the Deep Ocean Sediment-Derived Actinomycete Amycolatopsis albispora WP1T, Qihao Wu, Robert W. Deering, Gaiyun Zhang, Bixia Wang, Xin Li, Jiadong Sun, Jianwei Chen, Huawei Zhang, David C. Rowley, and Hong Wang

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Modeling and Classification of Gait Patterns between Anterior Cruciate Ligament Deficient and Intact Knees Based on Phase Space Reconstruction, Euclidean Distance and Neural Networks, Wenbao Wu, Wei Zeng, Limin Ma, Chengzhi Yuan, and Yu Zhang

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Costs and Effectiveness of Pharmacist-led Group Medical Visits for Type-2 Diabetes: A Multi-center Randomized Controlled Trial, Wen-Chih Wu, Tracey H. Taveira, Sean Jeffery, Lan Jiang, Lisa Tokuda, Joanna Musial, Lisa B. Cohen, and Fred Uhrle

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Mental accounting and behavioural hierarchy: Understanding consumer budgeting behaviour, Jing Jian Xiao and Barbara O'Neill

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Propensity to plan, financial capability, and financial satisfaction, Jing Jian Xiao and Barbara O'Neill

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Financial education and insurance advice seeking, Jing Jian Xiao and Nilton Porto

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The Association between Physical Activity and Metabolic Syndrome in Older Adults with Obesity, Furong Xu, Steven A. Cohen, Ingrid E. Lofgren, Geoffrey Greene, Michael J. Delmonico, and Mary L. Greaney