All URI faculty publications that are in DigitalCommons@URI are listed here. Some articles include full-text PDFs, and some include links to the publications on journal sites. This list includes all articles that faculty members have chosen to deposit according to the URI Open Access Policy, as well as other articles. This is not a comprehensive list of scholarly publications by URI faculty members. For questions, contact the URI Libraries at digitalcommons-group@uri.edu.

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Manuscripts from 2003

Winter-spring evolution and variability of HOx reservoir species, hydrogen peroxide, ad methyl hydroperoxide, in the northern middle to high latitudes, Julie A. Snow, Brian G. Heikes, John T. Merrill, Anthony J. Wimmers, Jennie L. Moody, and Christopher A. Cantrell

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Configuring flexible flowlines, Manbir S. Sodhi and Bhaba R. Sarker

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Age-dependent changes in the response of the stomach to thyroidal signaling in developmentally arrested larval summer flounder, Bruno Soffientino and Jennifer L. Specker

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Methodology for estradiol treatment in marine larval and juvenile fish: Uptake and clearance in summer flounder, Jennifer L. Specker and Mary Kelly Chandlee

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Comment on: Tonarini et al. (2003), Journal, Volume 27 (1), pp. 21-39 and Gonfiantini et al. (2003), Journal, Volume 27 (1), pp. 41-57, Arthur J. Spivack

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A theoretical and experimental investigation of a family of minimum-weight simply-supported beams, Sriruk Srithongchai, Murat Demircubuk, and Peter Dewhurst

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Comparisons of optimality criteria for minimum-weight dual material structures, Sriruk Srithongchai and Peter Dewhurst

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“Ferment,” an Ethic of Caring, and the Corrective Power of Dialogue, William J. Starosta and Guo-Ming Chen

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On Theorizing Difference: Culture as Centrism, William J. Starosta and Guo-Ming Chen

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Community-level collaboration for substance abuse prevention, John F. Stevenson and Roger E. Mitchell

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The Effects of Psychosocial Risk and Gender on School Attainment in Guatemala, Adrienne Y. Stith, Kathleen S. Gorman, and Naseem Choudhury

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Photochemistry in the arctic free troposphere: NOx budget and the role of odd nitrogen reservoir recycling, Craig Stroud, Sasha Madronich, Elliot Atlas, Brian Ridley, Frank Flocke, Andy Weinheimer, Bob Talbot, Alan Fried, Brian Wert, Richard Shetter, Barry Lefer, Mike Coffey, Brian Heikes, and Don Blake

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Perinatal morbidity, mild motor delay, and later school outcomes, Mary C. Sullivan and Margaret M. McGrath

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Effect of surface roughness on nitrogen flow in a microchannel using the direct simulation Monte Carlo method, Hongwei Sun and Mohammad Faghri

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Baroclinic eddy interactions with continental slopes and shelves, G. G. Sutyrin, G. Dail Rowe, L. M. Rothstein, and I. Ginis

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Spatio-temporal and interspecific variation in otolith trace-elemental fingerprints in a temperate estuarine fish assemblage, Stephen E. Swearer, Graham E. Forrester, Mark A. Steele, Andrew J. Brooks, and David W. Lea

Arbovirus surveillance in Rhode Island: Assessing potential ecologic and climatic correlates, Tsutomu Takeda, Chris A. Whitehouse, Michael Brewer, Alan D. Gettman, and Thomas N. Mather

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A temperature- and size-dependent model of sand shrimp (Crangon septemspinosa) predation on juvenile winter flounder (Pseudopleuronectes americanus), David L. Taylor and Jeremy S. Collie

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Effect of temperature on the functional response and foraging behavior of the sand shrimp Crangon septemspinosa preying on juvenile winter flounder Pseudopleuronectes americanus, David L. Taylor and Jeremy S. Collie

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Phycotoxin accumulation in zooplankton feeding on Alexandrium fundyense - Vector or sink, Gregory J. Teegarden, Allan D. Cembella, Carissa L. Capuano, Stacy H. Barron, and Edward G. Durbin

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Early rifting in the Narragansett Basin, Massachusetts-Rhode Island: Evidence from Late Devonian bimodal volcanic rocks, Margaret D. Thompson and O. Don Hermes

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Spatial and temporal variation of haploids and diploids in populations of four congeners of the marine alga Mazzaella, Carol S. Thornber and Steven D. Gaines

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Bubble clouds and Langmuir circulation: Observations and models, S. A. Thorpe, T. R. Osborn, D. M. Farmer, and S. Vagle

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Computational techniques and strategies for Monte Carlo thermodynamic calculations, with applications to nanoclusters, Robert Q. Topper, David L. Freeman, Denise Bergin, and Keirnan R. LaMarche

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Genes of the GadX-GadW Regulon in Escherichia coli, Don L. Tucker, Nancy Tucker, Zhuo Ma, John W. Foster, Regina L. Miranda, Paul S. Cohen, and Tyrrell Conway

Levo - A scalable processor with high IPC, Augustus K. Uht, David Morano, Alireza Khalafi, and David R. Kaeli

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The front on the Northern Flank of Georges Bank in spring: 2. Cross‐frontal fluxes and mixing, David S. Ullman, Andrew C. Dale, Dave Hebert, and John A. Barth

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Sedimentary and tectonic evolution of a trench-slope basin in the Nankai subduction zone of southwest Japan, Michael B. Underwood, Gregory F. Moore, Asahiko Taira, Adam Klaus, Moyra E.J. Wilson, Christopher L. Fergusson, Satoshi Hirano, Joan Steurer, Keir Becker, Luann Becker, Babette Boeckel, Barry Cragg, Allison Dean, Pierre Henry, Toshio Hisamitsu, Sabine Hunze, Miriam Kastner, Alex Maltman, Julia Morgan, Yuki Murakami, Demian Saffer, Mario Sánchez-Gómez, Elizabeth Screaton, David Smith, Arthur Spivak, Harold Tobin, and Kohtaro Ujiie

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Towards a definition of the real-time data distribution problem space, A. Uvarov and V. Fay-Wolfe

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Laboratory observations of gravity-capillary waves under transient wind forcing, B. Mete Uz, Tetsu Hara, Erik J. Bock, and Mark A. Donelan

An approach to direction finding based on a subspace perturbation expansion, Richard J. Vaccaro, Pranab Majumdar, and Norman L. Owsley

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Stages of change for healthy eating in diabetes: Relation to demographic, eating-related, health care utilization, and psychosocial factors, Michael Vallis, Laurie Ruggiero, Geoffrey Greene, Helen Jones, Bernard Zinman, Susan Rossi, Lynn Edwards, Joseph S. Rossi, and James O. Prochaska

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Molecular cloning, sequencing and characterization of omp48, the gene encoding for an antigenic outer membrane protein from Aeromonas veronii, R. C. Vázquez-Juárez, H. A. Barrera-Saldaña, N. Y. Hernández-Saavedra, M. Gómez-Chiarri, and Felipe Ascencio

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Geographic Information System-Based Digital Catalog for Managing Subsurface Geotechnical and Geologic Data, Anne I. Veeger, Daniel P. Murray, O. Don Hermes, Jon C. Boothroyd, and Nasir Hamidzada

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Community Interventions and Effective Prevention, Abraham Wandersman and Paul Florin

A human factors study on message design of variable message sign, Jyh Hone Wang and Yong Cao

Average instantaneous frequency (AIF) and average log-envelopes (ALE) for ASR with the aurora 2 database, Yadong Wang, Jesse Hansen, Gopi Krishna Allu, and Ramdas Kumaresan

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Remote sensing of Mangrove change along the Tanzania coast, Yeqiao Wang, Gregory Bonynge, Jarunee Nugranad, Michael Traber, Amani Ngusaru, James Tobey, Lynne Hale, Robert Bowen, and Vedast Makota

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Glufosinate reduces fungal diseases in transgenic glufosinate-resistant bentgrasses (Agrostis spp.), Yuexia Wang, Marsha Browning, Bridget A. Ruemmele, Joel M. Chandlee, Albert P. Kausch, and Noel Jackson

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Co-transfer and expression of chitinase, glucanase, and bar genes in creeping bentgrass for conferring fungal disease resistance, Yuexia Wang, Albert P. Kausch, Joel M. Chandlee, Hong Luo, Bridget A. Ruemmele, Marsha Browning, Noel Jackson, and Marian R. Goldsmith

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Springtime photochemistry at northern mid and high latitudes, Yuhang Wang, Brian Ridley, Alan Fried, Christopher Cantrell, Douglas Davis, Gao Chen, Julie Snow, Brian G. Heikes, Robert Talbot, Jack Dibb, Frank Flocke, Andrew Weinheimer, Nicola Blake, Donald Blake, Richard Shetter, Barry Lefer, Elliot Atlas, Michael Coffey, Jim Walega, and Brian Wert

The kinetics and mechanism of vesicle self-assembly in aqueous SDS/DTAB mixtures, Millie Wan, Andrea O'Connor, Arijit Bose, and Franz Grieser

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Backlash compensation in gear trains by means of open-loop modification of the input trajectory, Martin Warnecke and Musa Jouaneh

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Landslide tsunami case studies using a Boussinesq model and a fully nonlinear tsunami generation model, P. Watts, Stephan Grilli, J. T. Kirby, G. J. Fryer, and D. R. Tappin

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Beach programme may improve skin cancer prevention, M. A. Weinstock, J. S. Rossi, C. A. Redding, J. E. Maddock, Karen Glanz, Esther Azizi, and Orna Baron-Epel

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Letter to the editor, Linda Welters and Gary Kulik

Observations and modelling of the tidal bottom boundary layer on the southern flank of Georges bank, Sandra R. Werner, Robert C. Beardsley, Steven J. Lentz, David L. Hebert, and Neil S. Oakey

Some observations on undergraduate fluids engineering education, Frank M. White

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Arachidonic acid requirements in larval summer flounder, Paralichthys dentatus, Stephen Willey, David A. Bengtson, and Moti Harel

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Biological Signature of Scotian Shelf Water Crossovers on Georges Bank During Spring 1997, Karen F. Wishner, Dian J. Gifford, Barbara K. Sullivan, James J. Bisagni, Dawn M. Outram, and Donna E. Van Keuren

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A nonconventional Eulerian-Lagrangian single-node collocation method with hermite polynomials for unsteady-state advection-diffusion equations, Li Wu, Hong Wang, and George F. Pinder

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On-chip short-time interval measurement for high-speed signal timing characterization, Tian Xia and Jien Chung Lo

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Time-to-Voltage Converter for On-Chip Jitter Measurement, Tian Xia and Jien Chung Lo

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Modeling the performance of an aluminum-air cell, Shao Hua Yang and Harold Knickle

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Preparation of diarylamines by the addition of 4-(N,N-dimethylamino)phenyllithium to nitroarenes, Tianle Yang and Bongsup P. Cho

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Identifying high-risk patients from the emergency department to the home., Evelyn M.J. Yeaw and Pamela A. Burlingame

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Seasonal and ENSO variability in global ocean phytoplankton chlorophyll derived from 4 years of SeaWiFS measurements, James A. Yoder and Maureen A. Kennely

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Heat shock proteins are not sensitive indicators of hatchery stress in salmon, Jacques Zarate and Terence M. Bradley

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A unified, low-overhead framework to support continuous profiling and optimization, Ming Zhang, Xubin He, and Qing Yang

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Performability evaluation of networked storage systems using N-SPEK, Ming Zhang, Qing Yang, and Xubin He

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SPEK: A storage performance evaluation kernel module for block level storage systems, M. Zhang, Q. Yang, and X. He

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Modification of boundary lubrication by oil-soluble friction modifier additives, Yingxi Zhu, Hiroko Ohtani, Michael L. Greenfield, Marina Ruths, and Steve Granick

Manuscripts from 2002

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SEASONAL DISTRIBUTION AND ABUNDANCE OF FISHES AND DECAPOD CRUSTACEANS IN A CAPE COD ESTUARY, Kenneth W. Able, Michael P. Fahay, Kenneth L. Heck Jr., Charles T. Roman, Mark A. Lazzari, and Susan C. Kaiser

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In situ push-pull method to determine ground water denitrification in riparian zones+A51, Kelly Addy, D. Q. Kellogg, Arthur J. Gold, Peter M. Groffman, Gina Ferendo, and Carl Sawyer

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Risk factors for the development and progression of dyslipidemia after heart transplantation, Fatemeh Akhlaghi, Christopher H. Jackson, Jayan Parameshwar, Linda D. Sharples, and Andrew K. Trull

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Distribution of cyclosporin in organ transplant recipients, Fatemeh Akhlaghi and Andrew K. Trull

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Occurrence and mechanisms of formation of a dramatic thin layer of marine snow in a shallow Pacific fjord, Alice L. Alldredge, Timothy J. Cowles, Sally MacIntyre, Jan E. B. Rines, Percy L. Donaghay, Charles F. Greenlaw, D. V. Holliday, Margaret M. Dekshenieks, James M. Sullivan, and J. Ronald V. Zaneveld

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Evidence of Inter- and Intra-Molecular Crosslinking of Tyrosine Residues of Calmodulin Induced by Photo-Activation of Ruthenium(II), Oleg A. Andreev, Yana K. Reshetnyak, and Ronald H. Goldfarb

Growth of the northern quahog, Mercenaria mercenaria, in an experimental-scale upweller, Craig L. Appleyard and Joseph T. Dealteris

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Stratified flow over topography: Bifurcation fronts and transition to the uncontrolled state, Laurence Armi and David Farmer

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Numerical solution of melting processes for fixed and unfixed phase change material in the presence of magnetic field-simulation of low-gravity environment, Y. Asako, E. Gonçalves, M. Faghri, and M. Charmchi

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Effect of compressibility on gaseous flows in micro-channels, Yutaka Asako, Tianqi Pi, and Mohammad Faghri

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Multiscale measurements of ocean wave breaking probability, Michael L. Banner, Johannes R. Gemmrich, and David M. Farmer

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Sulfation of indoxyl by human and rat aryl (phenol) sulfotransferases to form indoxyl sulfate, E. Banoglu and S. King

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Question of ethics [2] (multiple letters), Ellsworth Barnard, W. C. Meecham, Robert T. Crow, and Wendy Wassyng Roworth

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The Horse and Deer Flies (Diptera: Tabanidae) of Rhode Island, Kristen Bartlett, Steven R. Alm, Roger Lebrun, and Howard S. Ginsberg

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Astrometry with the Hubble Space Telescope: A Parallax of the Fundamental Distance Calibrator RR Lyrae, G. Fritz Benedict, B. E. McArthur, L. W. Fredrick, T. E. Harrison, J. Lee, C. L. Slesnick, J. Rhee, R. J. Patterson, E. Nelan, W. H. Jefferys, W. van Altena, P. J. Shelus, O. G. Franz, L. H. Wasserman, Paul D. Hemenway, R. L. Duncombe, D. Story, A. L. Whipple, and A. J. Bradley

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The role of solution phase water on the deposition of thin films of poly(vinylidene fluoride), Marcel Benz, William B. Euler, and Otto J. Gregory

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Knowing Too Much and Never Enough: Knowledge and Moral Capital in Frances Trollope's "Life and Adventures of Michael Armstrong, the Factory Boy", Carolyn Betensky

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Transition Rates via Bethe Ansatz for the Spin-1/2 Heisenberg Chain, Daniel Biegel, Michael Karbach, and Gerhard Müller

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Testing the requirements of stages of physical activity among adults: The comparative effectiveness of stage-matched, mismatched, standard care, and control interventions, Bryan Blissmer and Edward McAuley

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Kuroshio temporal and spatial variations South of Japan determined from inverted echo sounder measurements, Jeffrey W. Book, Mark Wimbush, Shiro Imawaki, Hiroshi Ichikawa, Hiroshi Uchida, and Hideki Kinoshita

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Long-term contaminant trends at the picillo farm superfund site in Rhode Island, Thomas B. Boving and Julie Blue

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Directly measured mid-depth circulation in the northeastern North Atlantic Ocean, A. S. Bower, B. Le Cann, T. Rossby, W. Zenk, J. Gould, K. Speer, P. L. Richardson, M. D. Prater, and H. M. Zhang

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Evaluating methods to create a base map for a subaqueous soil inventory, Michael P. Bradley and Mark H. Stolt

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Geo-acoustic characterization of calcareous seabed in the Florida Keys, Horst G. Brandes, Armand J. Silva, and Donald J. Walter

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Perspectives on analyses of nucleic acid constituents: The basis of genomics, Phyllis R. Brown, Christina S. Robb, and Susan E. Geldart

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Modeling phytoplankton production: problems with the Eppley curve and an empirical alternative, Mark J. Brush, John W. Brawley, Scott W. Nixon, and James N. Kremer

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Direct measurements of light attenuation by epiphytes on eelgrass Zostera marina, Mark J. Brush and Scott W. Nixon

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Information Literacy: Challenges for the Future, Joanna M. Burkhardt, Mary C. MacDonald, and Andrée J. Rathemacher

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Comparison of algorithms for estimating ocean primary production from surface chlorophyll, temperature, and irradiance, Janet Campbell, David Antoine, Robert Armstrong, Kevin Arrigo, William Balch, Richard Barber, Michael Behrenfeld, Robert Bidigare, James Bishop, Mary-Elena Carr, Wayne Esaias, Paul Falkowski, Nicholas Hoepffner, Richard Iverson, David Keifer, Steven Lohrenz, John Marra, Andre Morel, John Ryan, Vladimir Vederinkov, Kirk Waters, Charles Yentsch, and James A. Yoder

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Effect of particle size and surface treatment on constitutive properties of polyester-cenosphere composites, R. J. Cardoso, A. Shukla, and A. Bose

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Inpatient Antipsychotic Drug Use in 1998, 1993, and 1989, Franca Centorrino, Eakin, Won-Myong Bahk, James P. Kelleher, Jessica L. Gören, Paola Salvatore, Samy Egli, and Ross J. Baldessarini

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Dynamic out of Plane Displacement Fields for an Inclined Crack in Graded Materials, V. B. Chalivendra, A. Shukla, and V. Parameswaran

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Some issues in the application of cohesive zone models for metal-ceramic interfaces, N. Chandra, H. Li, C. Shet, and H. Ghonem

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Characterization of DNA adducts derived from syn-benzo[ghi]fluoranthene- 3,4-dihydrodiol-5,5a-epoxide and comparative DNA binding studies with structurally-related anti-diolepoxides of benzo[ghi]fluoranthene and benzo[c]phenanthrene, Hui-Fang Chang, Duane M. Huffer, M. Paul Chiarelli, Lonnie R. Blankenship, Sandra J. Culp, and Bongsup P. Cho

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Characterization of DNA adducts and tetraols derived from anti-Benzo[ghi]fluoranthane-3,4-dihydrodiol-5,5a-epoxide, Hui-Fang Chang, Duane M. Huffer, M. Paul Chiarelli, and Bongsup P. Cho

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Optimal tracking of parameter drift in a chaotic system: Experiment and theory, A. Chatterjee, J. P. Cusumano, and D. Chelidze

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Multimode damage tracking and failure prognosis in electromechanical system, David Chelidze

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A dynamical systems approach to damage evolution tracking, part 1: Description and experimental application, David Chelidze, Joseph P. Cusumano, and Anindya Chatterjee