All URI faculty publications that are in DigitalCommons@URI are listed here. Some articles include full-text PDFs, and some include links to the publications on journal sites. This list includes all articles that faculty members have chosen to deposit according to the URI Open Access Policy, as well as other articles. This is not a comprehensive list of scholarly publications by URI faculty members. For questions, contact the URI Libraries at digitalcommons-group@uri.edu.

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Submissions from 2014

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Instrumentation for cell capacitance measurements: Switching sinusoidal excitations for studying cell membrane transport, Julia Shannon, Joseph Cullen, Prashil Patel, Eugene Chabot, and Ying Sun

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Characterization of weakly cemented sands from geophysical logs, Ravi Sharma and Christopher Baxter

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Partial pathogen protection by tick-bite sensitization and epitope recognition in peptide-immunized HLA DR3 transgenic mice, Wendy M. C. Shattuck, Megan C. Dyer, Joe Desrosiers, Loren D. Fast, Frances E. Terry, William D. Martin, Leonard Moise, Anne S. De Groot, and Thomas N. Mather

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A Polymorphic Microdeletion in the RGS9 Gene Suppresses PTB Binding and Associates with Obesity, Chong Shen, Meenakshi Sharma, Daniel C. Reid, Pengtao Li, Jeremy Celver, Norhashimah Abu Seman, Jinfeng Chen, Senthil K. Vasan, Hairu Wang, Tianwei Gu, Ying Liu, Wan Nazaimoon Wan Mohamud, Hongbing Shen, Kerstin Brismar, William G. Fairbrother, Abraham Kovoor, and Harvest F. Gu

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Can knowledge be more accessible in a virtual network?: Collective dynamics of knowledge transfer in a virtual knowledge organization network, Seung Kyoon Shin and Woong Kook

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Cyclic Peptide-Capped Gold Nanoparticles for Enhanced siRNA Delivery, Amir Nasrolahi Shirazi, Karissa L. Paquin, Niall G. Howlett, Dindyal Mandal, and Keykavous Parang

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Testing demographic differences for alcohol use initiation among adolescents for the decisional balance and situational temptation prevention inventories, Marie A. Sillice, Andrea L. Paiva, Steven F. Babbin, Heather A. McGee, Joseph S. Rossi, Colleen A. Redding, Kathryn S. Meier, Karin Oatley, and Wayne F. Velicer

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Erratum: Iron-Catalyzed Arylation of Heterocycles via Directed C-H Bond Activation (Organic Letters (2014) 16:3 (868-871) DOI: 10.1021/ol403634b), John J. Sirois, Riley Davis, and Brenton Deboef

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Iron-Catalyzed Arylation of Heterocycles via Directed C–H Bond Activation, John J. Sirois, Riley Davis, and Brenton DeBoef

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Fruit removal rate depends on neighborhood fruit density, frugivore abundance, and spatial context, Adam D. Smith and Scott R. McWilliams

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What to do when stopping over: Behavioral decisions of a migrating songbird during stopover are dictated by initial change in their body condition and mediated by key environmental conditions, Adam D. Smith and Scott R. McWilliams

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Using Nocturnal Flight Calls to Assess the Fall Migration of Warblers and Sparrows Along a Coastal Ecological Barrier, Adam D. Smith, Peter W. C. Paton, and Scott R. McWilliams

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Parent cognitive-behavioral intervention for the treatment of childhood anxiety disorders: A pilot study, Allison M. Smith, Ellen C. Flannery-Schroeder, Kathleen S. Gorman, and Nathan Cook

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Fish trophic engineering: Ecological effects of the invasive ascidian Didemnum vexillum (Georges Bank, northwestern Atlantic), Brian E. Smith, Jeremy S. Collie, and Nicole L. Lengyel

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The inner workings of collaboration in marine ecosystem-based management: A social network analysis approach, Tiffany C. Smythe, Robert Thompson, and Carlos Garcia-Quijano

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Preliminary Evaluation of Near Infrared Spectroscopy as a Method to Detect Plasma Leakage in Children with Dengue Hemorrhagic Fever, Babs Soller, Anon Srikiatkachorn, Fengmei Zou, Alan Rothman, In-Kyu Yoon, Robert V. Gibbons, Siripen Kalayanarooj, Stephen J. Thomas, and Sharone Green

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Gas hydrate distribution and carbon sequestration through coupled microbial methanogenesis and silicate weathering in the Krishna-Godavari Basin, offshore India, Evan A. Solomon, Arthur J. Spivack, Miriam Kastner, Marta E. Torres, and Gretchen Robertson

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The Air-Sea Interface and Surface Stress Under Tropical Cyclones, Alexander V. Soloviev, Roger Lukas, Mark A. Donelan, Brian K. Haus, and Isaac Ginis

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Transcriptional dynamics of bile salt export pump during pregnancy: Mechanisms and implications in intrahepatic cholestasis of pregnancy, Xiulong Song, Alexander Vasilenko, Yuan Chen, Leila Valanejad, Ruchi Verma, Bingfang Yan, and Ruitang Deng

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Magnetic parameter variations in the Chaona loess/paleosol sequences in the central Chinese Loess Plateau, and their significance for the middle Pleistocene climate transition, Yougui Song, Xiaomin Fang, John W. King, Jijun Li, Ishikawa Naoto, and Zhisheng An

Use of ensemble based methods for oil spill risk assessment investigations, Malcolm L. Spaulding, Chris Galagan, Lisa McStay, Tatsu Isaji, David Stuebe, and Rebecca Green

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Predation-associated modulation of movement-based signals by a Bahamian lizard, David S. Steinberg, Jonathan B. Losos, Thomas W. Schoener, David A. Spiller, Jason J. Kolbe, and Manuel Leal

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Speaking Truth to Power: The Legacies of Rachel Carson, Karen F. Stein

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Measuring behaviors of individual adolescents during group-based substance abuse intervention, L. A.R. Stein, Mary Clair, Rosemarie A. Martin, Shayna Soenksen, Rebecca Lebeau, Damaris J. Rohsenow, Christopher W. Kahler, Warren Hurlbut, and Peter M. Monti

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Basaltic Volcaniclastics from the Challenger Deep Forearc Segment, Mariana Convergent Margin: Implications for Tectonics and Magmatism of the Southernmost Izu–Bonin–Mariana Arc, Robert J. Stern, Minghua Ren, Katherine A. Kelley, Yasuhiko Ohara, Fernando Martinez, and Sherman H. Bloomer

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Typification and taxonomy of Gyrosigma tenuissimum (W. Sm.) J.W. Griffith & Henfr., comparison with Gyrosigma coelophilum N. Okamoto & Nagumo and description of two new taxa: Gyrosigma tenuissimum var. gundulae var. nov. and Gyrosigma baculum sp. nov. (Pleurosigmataceae, Bacillariophyta), Frithjof A.S. Sterrenburg, Myriam D. De Haan, Wulf E. Herwig, and Paul E. Hargraves

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Spin Flip Loss in Magnetic Storage of Ultracold Neutrons, A. Steyerl, Charles Kaufman, S. S. Malik, A. M. Desai, and Gerhard Müller

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Calculation of geometric phases in electric dipole searches with trapped spin-1/2 particles based on direct solution of the Schrödinger equation, Albert Steyerl, Charles Kaufman, Gerhard Müller, Surendra S. Malik, A. M. Desai, and R. Golub

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Quantitative Factors Proposed to Influence the Prevalence of Canine Tick-Borne Disease Agents in the United States, Roger W. Stich, Byron L. Blagburn, Dwight D. Bowman, Christopher Carpenter, M. Roberto Cortinas, Sidney A. Ewing, Desmond Foley, Janet E. Foley, Holly Gaff, Graham J. Hickling, R. Ryan Lash, Susan E. Little, Catherine Lund, Robert Lund, Thomas N. Mather, Glen R. Needham, William L. Nicholson, Julia Sharp, Andrea Varela-Stokes, and Dongmei Wang

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Inconsistencies in terminology and definitions of organic soil materials, Mark H. Stolt and Jonathan Bakken

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Adult acclimation to combined temperature and pH stressors significantly enhances reproductive outcomes compared to short-term exposures, Coleen Suckling, Melody S. Clark, Joelle Richard, Simon A. Morley, Michael A.S. Thorne, Elizabeth M. Harper, and Lloyd S. Peck

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Energy-storage-based low-frequency oscillation damping control using particle swarm optimization and heuristic dynamic programming, Xianchao Sui, Yufei Tang, Haibo He, and Jinyu Wen

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Reproduction of Endangered Big-Headed Turtle, Platysternon megacephalum (Reptilia: Testudines: Platysternidae), Yik-Hei Sung, Billy C.H. Hau, and Nancy E. Karraker

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Cranberry (Vaccinium macrocarpon) oligosaccharides decrease biofilm formation by uropathogenic Escherichia coli, Jiadong Sun, Jannie P.J. Marais, Christina Khoo, Kerry L. LaPlante, Rebecca M. Vejborg, Michael Givskov, Tim Tolker-Nielsen, Navindra P. Seeram, and David C. Rowley

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Tumor-penetrating acetalated dextran nanoparticles capable of tandem delivery of agents for the treatment of lung cancer, Qihua Sun and Samantha A. Meenach

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Impact of Dominant Breaking Waves on Air–Sea Momentum Exchange and Boundary Layer Turbulence at High Winds, Nobuhiro Suzuki, Tetsu Hara, and Peter P. Sullivan

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A Multiple COTS Receiver GNSS Spoof Detector -- Extensions, Peter F. Swaszek and Richard J. Hartnett

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GNSS Spoof Detection Using Shipboard IMU Measurements, Peter F. Swaszek, Scott A. Pratz, Benjamin N. Arocho, Kelly C. Seals, and Richard J. Hartnett

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Helicobacter canis colonization in sheep: A zoonotic link, Alton G. Swennes, Michelle L. Turk, Elise M. Trowel, Cassandra Cullin, Zeli Shen, Jassia Pang, Katherine H. Petersson, Floyd E. Dewhirst, and James G. Fox

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Quantitative food habits of the bullnose ray, Myliobatis freminvillii, in Delaware Bay, John A. Szczepanski and David A. Bengtson

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Hybrid classification with partial models, Bo Tang, Quan Ding, Haibo He, and Steven Kay

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Reactive power control of grid-connected wind farm based on adaptive dynamic programming, Yufei Tang, Haibo He, Zhen Ni, Jinyu Wen, and Xianchao Sui

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Frequency control using on-line learning method for island smart grid with EVs and PVs, Yufei Tang, Jun Yang, Jun Yan, Zhili Zeng, and Haibo He

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Did a submarine landslide contribute to the 2011 Tohoku tsunami?, David A. Tappin, Stephan T. Grilli, Jeffrey C. Harris, Robert J. Geller, Timothy Masterlark, James T. Kirby, Fengyan Shi, Gangfeng Ma, K.K.S. Thingbaijam, and P. Martin Mai

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Mercury bioaccumulation in cartilaginous fishes from Southern New England coastal waters: Contamination from a trophic ecology and human health perspective, David L. Taylor, Nicholas J. Kutil, Anna J. Malek, and Jeremy S. Collie

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Flaviviruses: Dengue, Stephen J. Thomas, Timothy P. Endy, and Alan L. Rothman

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Flaviviruses (Dengue, Yellow Fever, Japanese Encephalitis, West Nile Encephalitis, St. Louis Encephalitis, Tick-Borne Encephalitis, Kyasanur Forest Disease, Alkhurma Hemorrhagic Fever, Zika), Stephen J. Thomas, Timothy P. Endy, Alan L. Rothman, and Alan D. Barrett

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Sea-level change considerations for marine civil works - COPRI committee update on best practices, Jean O. Toilliez, Todd J. Mitchell, and Austin Becker

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Baseline socio-demographic characteristics and self-reported diet and physical activity shifts among recent immigrants participating in the randomized controlled lifestyle intervention: "Live Well", Alison Tovar, Rebecca Boulos, Sarah Sliwa, Aviva Must, David M. Gute, Nesly Metayer, Raymond R. Hyatt, Kenneth Chui, Alex Pirie, Christina Kamis Luongo, and Christina Economos

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Distinct Activation Phenotype of a Highly Conserved Novel HLA-B57-Restricted Epitope during Dengue Virus Infection, Elizabeth Townsley, Marcia Woda, Stephen J. Thomas, Siripen Kalayanarooj, Robert V. Gibbons, Ananda Nisalak, Anon Srikiatkhachorn, Sharone Green, Henry A.F. Stephens, Alan L. Rothman, and Anuja Matthew

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Slow swimming, fast strikes: effects of feeding behavior on scaling of anaerobic metabolism in epipelagic squid, Lloyd A. Trueblood and Brad A. Seibel

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Body composition explains sex differential in physical performance among older adults, Lisa A. Tseng, Matthew J. Delmonico, Marjolein Visser, Robert M. Boudreau, Bret H. Goodpaster, Ann V. Schwartz, Eleanor M. Simonsick, Suzanne Satterfield, Tamara Harris, and Anne B. Newman

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THE INFLUENCE OF SALT MARSH FUCOID ALGAE (ECADS) ON SEDIMENT DYNAMICS OF NORTHWEST ATLANTIC MARSHES, M. C. Tyrrell, Carol S. Thornber, J. A. Burkhardt, and M. Congretel

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Demand for ecolabeled seafood in the Japanese market: A conjoint analysis of the impact of information and interaction with other labels, Hirotsugu Uchida, Yuko Onozaka, Tamaki Morita, and Shunsuke Managi

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Do Japanese consumers care about sustainable fisheries? Evidence from an auction of ecolabelled seafood, Hirotsugu Uchida, Cathy A. Roheim, Hiroki Wakamatsu, and Christopher M. Anderson

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An Anomalous Near-Bottom Cross-Shelf Intrusion of Slope Water on the Southern New England Continental Shelf, D. S. Ullman, D. L. Codiga, A. Pfeiffer-Herbert, and Christopher R. Kincaid

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Health Studies Program Newsletter for 2014, URI Health Studies Program

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An optimization approach to the pole-placement design of robust linear multivariable control systems, Richard J. Vaccaro

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Cigarette smoking as an expression of independence and freedom among inmates in a tobacco-free prison in the united states, Jacob J. Van den Berg, Beth Bock, Mary B. Roberts, Lynda A.R. Stein, Peter D. Friedmann, Stephen A. Martin, and Jennifer G. Clarke

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Henry Simons’s death, Robert Van Horn

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TDOA based direct positioning maximum likelihood estimator and the cramer-rao bound, Naresh Vankayalapati, Steven Kay, and Quan Ding

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Intraspecific variation in vertical habitat use by tiger sharks (Galeocerdo cuvier) in the western North Atlantic, Jeremy J. Vaudo, Bradley M. Wetherbee, Guy Harvey, Richard S. Nemeth, Choy Aming, Neil Burnie, Lucy A. Howey-Jordan, and Mahmood S. Shivji

Implication of theory of games on inventory control policies: Pricing strategies, inventory levels and re-manufacturing, Masoud Vaziri and Manbir Sodhi

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Tree diversity in cacao agroforests in San Alejandro, Peruvian Amazon, Hana Vebrova, Bohdan Lojka, Thomas P. Husband, Maria Elena Chuspe Zans, Patrick Van Damme, Alexandr Rollo, and Marie Kalousova

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Homeoviscous response of Clostridium pasteurianum to butanol toxicity during glycerol fermentation, Keerthi P. Venkataramanan, Yogi Kurniawan, Judy J. Boatman, Cassandra H. Haynes, Katherine A. Taconi, Lenore M. Martin, Geoffrey D. Bothun, and Carmen Scholz

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Understanding the pharmacological properties of a metabolic PET tracer in prostate cancer, Nerissa Therese Viola-Villegas, Sean D. Carlin, Ellen Ackerstaff, Kuntal K. Sevak, Vadim Divilov, Inna Serganova, Natalia Kruchevsky, Michael Anderson, Ronald G. Blasberg, Oleg A. Andreev, Donald M. Engelman, Jason A. Koutcher, Yana K. Reshetnyak, and Jason S. Lewis

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Reliability and lifetime modeling of wireless sensor nodes, Chaonan Wang, Liudong Xing, Vinod M. Vokkarane, and Yan Sun

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A phased-mission framework for communication reliability in WSN, Chaonan Wang, Liudong Xing, Vinod M. Vokkarane, and Yan Lindsay Sun

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Circulating microRNAs in Pancreatic Juice as Candidate Biomarkers of Pancreatic Cancer, Jin Wang, Massimo Raimondo, Sushovan Guha, Jinyun Chen, Lixia Diao, Xiaoqun Dong, Michael B. Wallace, Ann M. Killary, Marsha L. Frazier, Timothy A. Woodward, Jing Wang, and Subrata Sen

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Update of enterovirus 71 infection: Epidemiology, pathogenesis and vaccine, Shih Min Wang and Ching Chuan Liu

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Dry powders based on mucus-penetrating nanoparticles entrapped microparticles for pulmonary delivery of Tobramycin, Zimeng Wang and Samantha A. Meenach

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S2-RAID: Parallel RAID architecture for fast data recovery, Jiguang Wan, Jibin Wang, Changsheng Xie, and Qing Yang

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Your Path to Transplant: A Randomized Controlled Trial of a Tailored Computer Education Intervention to Increase Living Donor Kidney Transplant, Amy D. Waterman, Mark L. Robbins, Andrea L. Paiva, John D. Peipert, Crystal S. Kynard-Amerson, Christina J. Goalby, LaShara A. Davis, Jessica L. Thein, Emily A. Schenk, Kari A. Baldwin, Stacy L. Skelton, Nicole R. Amoyal, and Leslie A. Brick

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Lateral line morphology and development and implications for the ontogeny of flow sensing in fishes, Jacqueline F. Webb

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Comparative development and evolution of two lateral line phenotypes in Lake Malawi cichlids, Jacqueline F. Webb, Nathan C. Bird, Lauren Carter, and Juleen Dickson

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The Mw 6.5 offshore Northern California earthquake of 10 January 2010: Ordinary stress drop on a high‐strength fault, Meng Wei and Jeffrey J. McGuire

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"measuring up" to ethical standards in service delivery to college students on the Autism Spectrum: A practical application of Powell's model for ethical practices in clinical phonetics and linguistics, Amy L. Weiss and Pamela Rohland

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Development and Validation of Green Eating Behaviors, Stage of Change, Decisional Balance, and Self-Efficacy Scales in College Students, Kathryn E. Weller, Geoffrey W. Greene, Colleen A. Redding, Andrea L. Paiva, Ingrid Lofgren, Jessica T. Nash, and Hisanori Kobayashi

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Mesoscale Convective System Surface Pressure Anomalies Responsible for Meteotsunamis Along the U.S. East Coast on June 13th, 2013, Christina A. Wertman, Richard M. Yablonsky, Yang Shen, John Merrill, Christopher R. Kincaid, and Robert A. Pockalny

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Pharmacological Interventions for Adolescents and Adults with ADHD: Stimulant and Nonstimulant Medications and Misuse of Prescription Stimulants, Lisa L. Weyandt, Danielle R. Oster, Marisa E. Marraccini, Bergljot Gyda Gudmundsdottir, Bailey A. Munro, Brynheld Martinez Zavras, and Ben Kuhar

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Electroless Plating of Thin Gold Films Directly onto Silicon Nitride Thin Films and into Micropores, Julie C. Whelan, Buddini Iroshika Karawdeniya, Y.M. Nuwan D.Y. Bandara, Brian D. Velleco, Caitlin M. Masterson, and Jason R. Dwyer

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Fully integrated GIS based LNG consequence model for spills on water, Nicole Whittier, Malcolm L. Spaulding, J. Craig Swanson, and Kathy Jayko

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Below the Disappearing Marshes of an Urban Estuary: Historic Nitrogen Trends and Soil Structure, Cathleen Wigand, Charles T. Roman, Earl Davey, Mark Stolt, Roxanne Johnson, Alana Hanson, Elizabeth B. Watson, S. Bradley Moran, Donald R. Cahoon, James C. Lynch, and Patricia Rafferty

Estimating habitat carrying capacity for migrating and wintering waterfowl: Considerations, pitfalls and improvements, Christopher K. Williams, Bruce D. Dugger, Michael G. Brasher, John M. Coluccy, Dane M. Cramer, John M. Eadie, Matthew J. Gray, Heath M. Hagy, Mark Livolsi, Scott R. Mcwilliams, Mark Petrie, Gregory J. Soulliere, John M. Tirpak, and Elisabeth B. Webb

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Trophic ecology and vertical patterns of carbon and nitrogen stable isotopes in zooplankton from oxygen minimum zone regions, Rebecca L. Williams, Stuart Wakeham, Rick McKinney, and Karen F. Wishner

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Senior Project Design of a Two Meter Autonomous Sailboat, Ben Williamsz, Julia Kane, Richard J. Hartnett, and Peter F. Swaszek

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Integrating aerial and ship surveys of marine birds into a combined density surface model: A case study of wintering Common Loons, Kristopher J. Winiarski, M. Louise Burt, Eric Rexstad, David L. Miller, Carol L. Trocki, Peter W.C. Paton, and Scott R. Mcwilliams

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A spatial conservation prioritization approach for protecting marine birds given proposed offshore wind energy development, Kristopher J. Winiarski, David L. Miller, Peter W.C. Paton, and Scott R. McWilliams

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Little Late Holocene Strain Accumulation and Release on the Aleutian Megathrust Below the Shumagin Islands, Alaska, Robert C. Witter, Richard W. Briggs, Simon E. Engelhart, Guy Gelfenbaum, Richard D. Koehler, and William D. Barnhart

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Importance of remission and residual somatic symptoms in health-related quality of life among outpatients with major depressive disorder: a cross-sectional study, Jong-Min Woo, Jin Jeon, Eunsun Noh, Hyo-Jin Kim, Sun Woo Lee, Kyung Kyu Lee, Sung Hwan Kim, and Jin Pyo Hong

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A comparison of vessel-mounted acoustic doppler current profiler and satellite altimeter estimates of sea surface height and transports between New Jersey and Bermuda along the CMV Oleander route, Jessica S. Worst, Kathleen A. Donohue, and T. Rossby

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Assessing Parental Self-Efficacy for Obesity Prevention Related Behaviors, Julie A. Wright, William G. Adams, Robert G. Laforge, Donna Berry, and Robert H. Friedman

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Centrifugation-based assay for examining nanoparticle-lipid membrane binding and disruption, Aihong Xi and Geoffrey D. Bothun

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Earlier financial literacy and later financial behaviour of college students, Jing Jian Xiao, Sun Young Ahn, Joyce Serido, and Soyeon Shim

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Factors Associated with Financial Independence of Young Adults, Jing Jian Xiao, Swarn Chatterjee, and Jinhee Kim

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Career Preparations of High School Students in China, Japan, South Korea, and USA, Jing Jian Xiao and Barbara M. Newman

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Consumer debt delinquency by family lifecycle categories, Jing Jian Xiao and Rui Yao

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Sparse-Representation-Based Classification with Structure-Preserving Dimension Reduction, Jin Xu, Guang Yang, Yafeng Yin, Hong Man, and Haibo He

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Real-time surface plasmon resonance study of biomolecular interactions between polymerase and bulky mutagenic DNA lesions, Lifang Xu, V. G. Vaidyanathan, and Bongsup P. Cho

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Generation of cathode passivation films via oxidation of lithium bis(oxalato) borate on high voltage spinel (LiNi0.5Mn 1.5O4), Mengqing Xu, Nikolaos Tsiouvaras, Arnd Garsuch, Hubert A. Gasteiger, and Brett L. Lucht