All URI faculty publications that are in DigitalCommons@URI are listed here. Some articles include full-text PDFs, and some include links to the publications on journal sites. This list includes all articles that faculty members have chosen to deposit according to the URI Open Access Policy, as well as other articles. This is not a comprehensive list of scholarly publications by URI faculty members.

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Manuscripts from 2015

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Presence of oxygen and aerobic communities from sea floor to basement in deep-sea sediments, Steven D'hondt, Fumio Inagaki, Carlos Alvarez Zarikian, Lewis J. Abrams, Nathalie Dubois, Tim Engelhardt, Helen Evans, Timothy Ferdelman, Britta Gribsholt, Robert N. Harris, Bryce W. Hoppie, Jung Ho Hyun, Jens Kallmeyer, Jinwook Kim, Jill E. Lynch, Claire C. Mckinley, Satoshi Mitsunobu, Yuki Morono, Richard W. Murray, Robert Pockalny, Justine Sauvage, Takaya Shimono, Fumito Shiraishi, David C. Smith, Christopher E. Smith-Duque, Arthur J. Spivack, Bjorn Olav Steinsbu, Yohey Suzuki, Michal Szpak, Laurent Toffin, Goichiro Uramoto, Yasuhiko T. Yamaguchi, Guo Liang Zhang, Xiao Hua Zhang, and Wiebke Ziebis

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Exploring the Planetary Boundary for Chemical Pollution, Miriam L. Diamond, Cynthia A. de Wit, Sverker Molander, Martin Scheringer, Thomas Backhaus, Rainer Lohmann, Rickard Arvidsson, Åke Bergman, Michael Hauschild, Ivan Holoubek, Linn Persson, Noriyuki Suzuki, Marco Vighi, and Cornelius Zetzsch

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Monitoring of sequentially loaded reagents to a detection area in a microfluidic chip, Nicholas M. Difilippo, John D. Jones, Mark J. Difilippo, Constantine Anagnostopoulos, and Mohammad Faghri

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Characterization of Different Microsoft Kinect Sensor Models, Nicholas M. DiFilippo and Musa Jouaneh

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High-SNR model order selection using exponentially embedded family and its applications to curve fitting and clustering, Quan Ding, Steven Kay, and Xiaorong Zhang

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Global Asymptotic Stability for Quadratic Fractional Difference Equation, Mark DiPippo, Ed J. Janowski, and Mustafa Kulenovic

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Selective Detection of Non-Aromatic Pesticides via Cyclodextrin-Promoted Fluorescence Modulation, Dana J. DiScenza and Mindy Levine

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Etheliaceae fam. nov. (Gigartinales, Rhodophyta), with a clarification of the generitype of Ethelia and the addition of six novel species from warm waters, Kyatt R. Dixon, Gary W. Saunders, Craig W. Schneider, and Christopher E. Lane

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Collagen Gel Formation in the Presence of a Carbon Nanobrush, George W. Dombi, Kaushalkumar Purohit, Lenore M. Martin, and Sze C. Yang

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Simulation of floating structure dynamics in waves by implicit coupling of a fully non-linear potential flow model and a rigid body motion approach, E. Dombre, M. Benoit, D. Violeau, C. Peyrard, and S. T. Grilli

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Predictive event-triggered control based on heuristic dynamic programming for nonlinear continuous-time systems, Lu Dong, Xiangnan Zhong, Changyin Sun, and Haibo He

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Heart rate monitoring during physical exercise, Anthony D'Onofrio, Christian Chipouras, Kyle Sexton, Eugene Chabot, and Ying Sun

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Predation Risk Perception, Food Density and Conspecific Cues Shape Foraging Decisions in a Tropical Lizard, Maximilian Drakeley, Oriol Lapiedra, and Jason J. Kolbe

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Effect of lamellarity and size on calorimetric phase transitions in single component phosphatidylcholine vesicles, Jelena Drazenovic, Hairong Wang, Kristina Roth, Jiangyue Zhang, Selver Ahmed, Yanjing Chen, Geoffrey Bothun, and Stephanie L. Wunder

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Preferential depletion of zinc within Costa Rica upwelling dome creates conditions for zinc co-limitation of primary production, P. Dreux Chappell, Jagruti Vedmati, Karen E. Selph, Heather A. Cyr, Bethany D. Jenkins, Michael R. Landry, and James W. Moffett

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Manager Perspectives on Communication and Public Engagement in Ecological Restoration Project Success, Caroline Gottschalk Druschke and Kristen C. Hychka

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Spatiotemporal Correlations between Water Footprint and Agricultural Inputs: A Case Study of Maize Production in Northeast China, Peili Duan, Lijie Qin, Yeqiao Wang, and Hongshi He

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A multi-smartwatch system for assessing speech characteristics of people with dysarthria in group settings, Harishchandra Dubey, J. Cody Goldberg, Kunal Mankodiya, and Leslie Mahler

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EchoWear: Smartwatch Technology for Voice and Speech Treatments of Patients with Parkinson’s Disease, Harishchandra Dubey, Jon C. Goldberg, Mohammadreza Abtahi, Leslie Mahler, and Kunal Mankodiya

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Fog Data: Enhancing Telehealth Big Data Through Fog Computing, Harishchandra Dubey, Jing Yang, Nick Constant, Amir Mohammad Amiri, Qing Yang, and Kunal Mankodiya

Amplifying the voice of youth: The partners for change outcome management system, Barry L. Duncan and Jacqueline A. Sparks

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Cobalt-based age models of pelagic clay in the South Pacific Gyre, Ann G. Dunlea, Richard W. Murray, Justine Sauvage, Robert A. Pockalny, Arthur J. Spivack, Robert N. Harris, and Steven D'Hondt

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Dust, Volcanic Ash, and the Evolution of the South Pacific Gyre through the Cenozoic, Ann G. Dunlea, Richard W. Murray, Justine Sauvage, Arthur J. Spivack, Robert N. Harris, and Steven D'Hondt

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Flame-retardant co-solvent incorporation into lithium-ion coin cells with Si-nanoparticle anodes, Ronald P. Dunn, Cao Cuong Nguyen, and Brett L. Lucht

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The Evolution of Difficult Childbirth and Helpless Hominin Infants, Holly M. Dunsworth and Leah Eccleston

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Developing Feasible and Effective School-Based Interventions for Children With ASD: A Case Study of the Iterative Development Process, Jessica R. Dykstra Steinbrenner, Linda R. Watson, Brian A. Boyd, Kaitlyn P. Wilson, Elizabeth R. Crais, Grace T. Baranek, Michelle Flippin, and Sally Flagler

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A quantitative model of water radiolysis and chemical production rates near radionuclide-containing solids, Mary E. Dzaugis, Arthur J. Spivack, and Steven D'Hondt

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An immunoinformatic approach for identification of Trypanosoma cruzi HLA-A2-restricted CD8+ T cell epitopes, Christopher S. Eickhoff, Daniel Van Aartsen, Francis E. Terry, Sheba K. Meymandi, Mahmoud M. Traina, Salvador Hernandez, William D. Martin, Leonard Moise, Anne S. De Groot, and Daniel F. Hoft

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The thermal stress response to diel vertical migration in the hyperiid amphipod Phronima sedentaria, Leanne E. Elder and Brad A. Seibel

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Volcanoes and Tourism, Patricia Erfurt-Cooper, Haraldur Sigurdsson, and Rosaly M.C. Lopes

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The Functional Well-Being Scale: A measure of functioning loss due to well-being-related barriers, Kerry E. Evers, Patricia H. Castle, Anne C. Fernandez, James O. Prochaska, Janice M. Prochaska, and Andrea L. Paiva

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Blast Performance of Foam Filled Sandwich Panels Under Extreme Temperatures, Payam Fahr, Murat Yazici, and Arun Shukla

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Data-driven heuristic dynamic programming with virtual reality, Xiao Fang, Dezhong Zheng, Haibo He, and Zhen Ni

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From Luzon Strait to Dongsha Plateau: Stages in the Life of an Internal Wave, David M. Farmer, Matthew H. Alford, Ren-Chieh Lien, Ying Jiang Yang, Ming-Huei Chang, and Qiang Li

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"Unresolved Complex Mixture" (UCM): A brief history of the term and moving beyond it, John W. Farrington and James G. Quinn

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Refining Measures for Assessing Problematic/Addictive Digital Gaming Use in Clinical and Research Settings, Kyle Faust and David Faust

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Evaluation of immunization training in the curriculum of first- and third-year pharmacy students, Brett Feret, Orr, Jeffrey Bratberg, and Celia MacDonnell

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The Impact of a Mindfulness Based Program on Perceived Stress, Anxiety, Depression and Sleep of Incarcerated Women, Ginette G. Ferszt, Robin J. Miller, Joyce E. Hickey, Fleet Maull, and Kate Crisp

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Comparison of surface chlorophyll, primary production, and satellite imagery in hydrographically different sounds off southern new England, Lindsey Fields, Jeffrey Mercer, Kimberly J.W. Hyde, Mark Brush, Scott W. Nixon, Candace Oviatt, Malia L. Schwartz, David Ullman, and Daniel Codiga

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Developmental differences between boys and girls result in sex-specific physical fitness changes from fourth to fifth grade, Shawn D. Flanagan, Courtenay Dunn-Lewis, Disa L. Hatfield, Lindsay J. Distefano, Maren S. Fragala, Mark Shoap, Mary Gotwald, John Trail, Ana L. Gomez, Jeff S. Volek, Cristina Cortis, Brett A. Comstock, David R. Hooper, Tunde K. Szivak, David P. Looney, William H. Dupont, Danielle M. McDermott, Michael C. Gaudiose, and William J. Kraemer

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Key seabird areas in southern New England identified using a community occupancy model, Nicholas P. Flanders, Beth Gardner, Kristopher J. Winiarski, Peter W.C. Paton, Taber Allison, and Allan F. O'Connell

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Fathers' and Mothers' Verbal Responsiveness and the Language Skills of Young Children With Autism Spectrum Disorder, Michelle Flippin and Linda R. Watson

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Competition in reef fishes, Graham E. Forrester

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Comparing monitoring data collected by volunteers and professionals shows that citizen scientists can detect long-term change on coral reefs, Graham E. Forrester, Patricia Baily, Dennis Conetta, Linda Forrester, Elizabeth Kintzing, and Lianna Jarecki

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Episodic Disturbance from Boat Anchoring Is a Major Contributor to, but Does Not Alter the Trajectory of, Long-Term Coral Reef Decline, Graham E. Forrester, Rebecca L. Flynn, Linda M. Forrester, and Lianna L. Jarecki

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Environmental change strategies targeting drug abuse prevention, Karen Friend, Kristianna Pettibone, Paul Florin, Jamie Vela, and Jessica Nargiso

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Whole truths vs. half truths - And a search for clarity in long-term water temperature records, R. W. Fulweiler, A. J. Oczkowski, K. M. Miller, C. A. Oviatt, and M. E.Q. Pilson

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ES&T Guest Comment: Celebrating Bidleman’s 1988 “Atmospheric Processes”, Elisabeth Galarneau, Janet Arey, Roger Atkinson, Jordi Dachs, Steven Eisenreich, Tom Harner, Ronald A. Hites, Gerhard Lammel, Rainer Lohmann, Donald Mackay, Mustafa Odabasi, James F. Pankow, Martin Scheringer, Deborah Swackhamer, Yucel Tasdemir, and Frank Wania

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A Preliminary Full‐Wave Ambient‐Noise Tomography Model Spanning from the Juan de Fuca and Gorda Spreading Centers to the Cascadia Volcanic Arc, Haiying Gao and Yang Shen

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Validation of Recent Shear Wave Velocity Models in the United States with Full-Wave Simulation, Haiying Gao and Yang Shen

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IMMIGRATION ATTITUDES AND SUPPORT FOR THE WELFARE STATE IN THE AMERICAN MASS PUBLIC, James C. Garand, Ping Xu, and Belinda C. Davis

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Coastal resource foraging, life satisfaction, and well-being in southeastern Puerto Rico, Carlos G. García-Quijano, John J. Poggie, Ana Pitchon, and Miguel H. Del Pozo

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Designing AMPed: The Practical Antimicrobial Peptide Editable Database, Tripti Garg, George Konstantinidis, Joan Peckham, Admir Monteiro, Roxanne LaCroix, and Lenore M. Martin

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Designing Interprofessional Education Curriculum Using Multiple Conceptual Frameworks, Paul George, P. MacDonnell, Jayashree Nimmagadda, Judy Murphy, and Richard Dollase

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Some numerical aspects of modelling flow around hydraulic structures using incompressible SPH, Z. Ghadampour, M. R. Hashemi, N. Talebbeydokhti, S. P. Neill, and A. H. Nikseresht

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Alternative matrices for therapeutic drug monitoring of immunosuppressive agents using LC-MS/MS, Mwlod Ghareeb and Fatemeh Akhlaghi

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Development and validation of an UPLC-MS/MS assay for quantitative analysis of the ghrelin receptor inverse agonist PF-5190457 in human or rat plasma and rat brain, Mwlod Ghareeb, Lorenzo Leggio, Ayman El-Kattan, and Fatemeh Akhlaghi

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Predictors of relapse among smokers: Transtheoretical effort variables, demographics, and smoking severity, N. S. Gökbayrak, Andrea L. Paiva, Bryan J. Blissmer, and James O. Prochaska

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Automatic sleep apnea detection using fuzzy logic, Aminollah Golrou, Keivan Maghooli, Amir Mohammad Amiri, Kunal Mankodiya, and Kazem Ghaemi

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Geometric phases in electric dipole searches with trapped spin-1/2 particles in general fields and measurement cells of arbitrary shape with smooth or rough walls, R. Golub, Charles Kaufman, Gerhard Müller, and A. Steyerl

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Clinical Implications of Vancomycin Heteroresistant and Intermediately Susceptible Staphylococcus aureus, Diane M. Gomes, Kristina E. Ward, and Kerry L. LaPlante

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The use of -omic tools in the study of disease processes in marine bivalve mollusks, Marta Gómez-Chiarri, Ximing Guo, Arnaud Tanguy, Yan He, and Dina Proestou

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Developing tools for the study of molluscan immunity: Thesequencing of the genome of the eastern oyster, Crassostrea virginica, Marta Gómez-Chiarri, Wesley C. Warren, Ximing Guo, and Dina Proestou

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Interactions between invasive herbivores and their long-term impact on New England hemlock forests, S. Gómez, L. Gonda-King, C. M. Orians, D. A. Orwig, R. Panko, L. Radville, N. Soltis, C. S. Thornber, and E. L. Preisser

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Effects of seasonal changes in ambient noise sources on monitoring temporal variations in crustal properties, Meng Gong, Yang Shen, Hongyi Li, Xinfu Li, and Jinsheng Jia

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Impact of Study Skills and Parent Education on First-Year GPA Among College Students With and Without ADHD: A Moderated Mediation Model, Matthew J. Gormley, Trevor Pinho, Brittany Pollack, Kristina Puzino, Melanie K. Franklin, Chelsea Busch, George J. DuPaul, Lisa Weyandt, and Arthur D. Anastopoulos

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A comparative study between motivated learning and reinforcement learning, J. Graham, J. A. Starzyk, Z. Ni, H. He, T. H. Teng, and A. H. Tan

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Professional practice committee, Richard W. Grant, W. Donner, Judith E. Fradkin, Charlotte Hayes, William H. Herman, William C. Hsu, Eileen Kim, Lori Laffel, Rodica Pop-Busui, Neda Rasouli, Desmond Schatz, Joseph A. Stankaitis, Tracey H. Taveira, Deborah J. Wexler, Jane L. Chiang, and Erika Gebel Berg

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Study Protocol for Young & Strong: A Cluster Randomized Design to Increase Attention to Unique Issues Faced by Young Women with Newly Diagnosed Breast Cancer, Mary L. Greaney, Kim Sprunck-Harrild, Kathryn J. Ruddy, Jennifer Ligibel, William T. Barry, Emily Baker, Meghan Meyer, Karen M. Emmons, and Ann H. Partridge

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XANES measurements of sulfur chemistry during asphalt oxidation, Michael L. Greenfield, Michael Byrne, Sudipa Mitra-Kirtley, Eric M. Kercher, Trudy B. Bolin, Tianpin Wu, Paul R. Craddock, Kyle D. Bake, and Andrew E. Pomerantz

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Orienting Patients to Greater Opioid Safety: Models of Community Pharmacy-Based Naloxone, Traci C. Green, F. Dauria, Jeffrey P. Bratberg, Corey S. Davis, and Alexander Y. Walley

Modeling of tsunami propagation in the atlantic ocean basin for tsunami hazard assessment along the North shore of Hispaniola, Annette R. Grilli, Stéphan T. Grilli, Eric David, and Christophe Coulet

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Toward wind farm monitoring optimization: assessment of ecological zones from marine landscapes using machine learning algorithms, Annette R. Grilli and Emily J. Shumchenia

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Comparing Inundation Maps Developed Using WHAFIS and STWAVE: A Case Study in Washington County, RI, Annette R. Grilli, Malcolm L. Spauding, Lauren Schambach, Jane Smith, and Mary Bryant

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Modeling Tsunami Sources and Their Propagation in the Atlantic Ocean for Coastal Tsunami Hazard Assessments and Inundation Mapping along the U.S. East Coast, Stéphan Grilli, Annette R. Grilli, Babak Tehranirad, and James T. Kirby

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Modeling of tsunami detection by high frequency radar based on simulated tsunami case studies in the mediterranean sea, Stéphan T. Grilli, Samuel Grosdidier, and Charles Antoine Guérin

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Modeling of SMF tsunami hazard along the upper US East Coast: detailed impact around Ocean City, MD, Stephan T. Grilli, Christopher O’Reilly, Jeffrey C. Harris, Tayebeh Tajalli Bakhsh, Babak Tehranirad, Saeideh Banihashemi, James T. Kirby, Christopher D.P. Baxter, Tamara Eggeling, Gangfeng Ma, and Fengyan Shi

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Extraocular spectral photosensitivity in the tentacles of Hydra vulgaris, S. Guertin and G. Kass-Simon

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Herbivore Impacts on Two Morphologically Similar Bloom-Forming Ulva Species in a Eutrophic Bay, Michele Guidone, Carol S. Thornber, and Kathryn L. Van Alstyne

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Statins: An Update on Clinical Issues and Selected Adverse Effects, Alev H. Gulum and Hume

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Push or Pull? Design of Content Delivery Systems, Hong Guo, Sean Marston, and Yuwen Chen

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Mapping and assessing typhoon-induced forest disturbance in Changbai Mountain National Nature Reserve using time series Landsat imagery, Xiao yi Guo, Hong yan Zhang, Yeqiao Wang, and John Clark

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Implosion of longitudinally off-centered cylindrical volumes in a confining environment, Sachin Gupta, James M. LeBlanc, and Arun Shukla

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Sympathetic underwater implosion in a confining environment, Sachin Gupta, James M. LeBlanc, and Arun Shukla

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Application of 3-D Digital Image Correlation Technique to Study Underwater Implosion, Sachin Gupta, Venkitanarayanan Parameswaran, Michael Sutton, and Arun Shukla

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Evaluation of Differences in Percentage of International Normalized Ratios in Range Between Pharmacist-Led and Physician-Led Anticoagulation Management Services, Vasudha Gupta, J. Kogut, and Sarah Thompson

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Integrated conservation and development: Evaluating a community-based marine protected area project for equality of socioeconomic impacts, Georgina G. Gurney, Robert L. Pressey, Joshua E. Cinner, Richard Pollnac, and Stuart J. Campbell

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Development and Validation of an Epitope Prediction Tool for Swine (PigMatrix) Based on the Pocket Profile Method, Andres H. Gutiérrez, William D. Martin, Chris Bailey-Kellogg, Frances Terry, Leonard Moise, and Anne S. De Groot

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Draft Genome Sequence of the Shellfish Larval Probiotic Bacillus pumilus RI06-95, Meagan Hamblin, Edward Spinard, Marta Gomez-Chiarri, David R. Nelson, and David C. Rowley

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Finite element analysis of transient ballistic-diffusive phonon heat transport in two-dimensional domains, Sina Hamian, Toru Yamada, Mohammad Faghri, and Keunhan Park

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Wave Boundary Layer Turbulence over Surface Waves in a Strongly Forced Condition, Tetsu Hara and Peter P. Sullivan

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Comparing Visual and Statistical Analysis in Single-Case Studies Using Published Studies, Magadalena Harrington and Wayne Velicer

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Typology of alcohol users based on longitudinal patterns of drinking, Magdalena Harrington, Wayne F. Velicer, and Susan Ramsey

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Persistent Intra-Specific Variation in Genetic and Behavioral Traits in the Raphidophyte, Heterosigma akashiwo, Elizabeth L. Harvey, Susanne Menden-Deuer, and Tatiana A. Rynearson

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Process-Based and Data-Based Storm Surge Models for Rhode Island Coastal Flooding within the STORMTOOLS Framework, M. Reza Hashemi and Malcolm Spaulding

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Habitat Selection of a Coastal Shark Species Estimated from an Autonomous Underwater Vehicle, D. E. Haulsee, M. W. Breece, D. C. Miller, Bradley M. Wetherbee, D. A. Fox, and M. J. Oliver

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Intensity of Th and Pa scavenging partitioned by particle chemistry in the North Atlantic Ocean, Christopher T. Hayes, Robert F. Anderson, Martin Q. Fleischer, Sebastian M. Vivancos, Phoebe J. Lam, Daniel C. Ohnemus, Kuo-Fang Huang, Laura F. Robinson, Yanbin Lu, Hai Cheng, R. Lawrence Edwards, and S. Bradley Moran

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230Th and 231Pa on GEOTRACES GA03, the U.S. GEOTRACES North Atlantic transect, and implications for modern and paleoceanographic chemical fluxes, Christopher T. Hayes, Robert F. Anderson, Martin Q. Fleisher, Kuo-Fang Huang, Laura F. Robinson, Yanbin Lu, Hai Cheng, R. Lawrence Edwards, and S. Bradley Moran

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Electro-mechanical Behavior of Graphene–Polystyrene Composites Under Dynamic Loading, N. Heeder, I. Chakraborty, A. Bose, and A. Shukla

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Particle templated graphene-based composites with tailored electro-mechanical properties, Nicholas Heeder, Abayomi Yussuf, Indrani Chakraborty, Michael P. Godfrin, Robert Hurt, Anubhav Tripathi, Arijit Bose, and Arun Shukla