Manuscripts from 2017
Changes in the size structure of marine fish communities, Richard J. Bell, Jeremy Collie, Trevor A. Branch, Michael J. Fogarty, Coilin Minto, and Daniel Ricard
Numerical investigation of the Arctic ice–ocean boundary layer and implications for air–sea gas fluxes, Arash Bigdeli, Brice Loose, An T. Nguyen, and Sylvia T. Cole
Forearc Peridotites from Tonga Record Heterogeneous Oxidation of the Mantle following Subduction Initiation, Suzanne K. Birner, Jessica M. Warren, Elizabeth Cottrell, Fred A. Davis, Katherine A. Kelley, and Trevor J. Falloon
Impact of Langmuir Turbulence on Upper Ocean Response to Hurricane Edouard: Model and Observations, A. Blair, I. Ginis, T. Hara, and E. Ulhorn
Obtaining Phytoplankton Diversity from Ocean Color: A Scientific Roadmap for Future Development, Astrid Bracher, Heather A. Bouman, Robert J.W. Brewin, Annick Bricaud, Vanda Brotas, Aurea M. Ciotti, Lesley Clementson, Emmanuel Devred, Annalisa Di Cicco, Stephanie Dutkiewicz, Nick J. Hardman-Mountford, Anna E. Hickman, Martin Hieronymi, Takafumi Hirata, Svetlana N. Losa, Colleen B. Mouw, Emanuele Organelli, Dionysios E. Raitsos, Julia Uitz, Meike Vogt, and Aleksandra Wolanin
Contaminants of emerging concern in the open sea waters of the Western Mediterranean, Miroslav Brumovský, Jitka Bečanová, Jiří Kohoutek, Mireno Borghini, and Luca Nizzetto
First Toba supereruption revival: Comment and Reply: REPLY, Chang-Hwa Chen, Meng-Yang Lee, Yoshiyuki Iizuka, Jonathan Dehn, Kuo-Yen Wei, and Steven Carey
Indirect effects of bottom fishing on the productivity of marine fish, Jeremy Collie, Jan Geert Hiddink, Tobias van Kooten, Adriaan D. Rijnsdorp, Michel J. Kaiser, Simon Jennings, and Ray Hilborn
Exploration of the Southern California Borderland, Marie-Helene Cormier, Katherine L. C. Bell, Stephanie M. Sharuga, Chris Castillo, James Conrad, Diva Amon, Mark Legg, Michael L. Brennan, Kelsey Barnhill, Lawrence L. Lovell, Ashley Marrazino, Simon L. Klemperer, and Renato Kane
Flank instability assessment at Kick-’em-Jenny submarine volcano (Grenada, Lesser Antilles): a multidisciplinary approach using experiments and modeling, F. J.-Y. Dondin, M. J. Heap, R. E. A. Robertson, J-F. M. Dorville, and Steven Carey
A Genome-Scale Model of Shewanella piezotolerans Simulates Mechanisms of Metabolic Diversity and Energy Conservation, Keith Dufault-Thompson, Huahua Jian, Ruxue Cheng, Jiefu Li, Fengping Wang, and Ying Zhang
A Miniature Acoustic Device for Tracking Small Marine Animals or Submerged Drifters, Godi Fischer, Thomas Rossby, and Daniel Moonan
Seismic evidence for a possible deep crustal hot zone beneath Southwest Washington, Ashton F. Flinder and Yang Shen
Erratum: Publisher Correction: Seismic evidence for a possible deep crustal hot zone beneath Southwest Washington (Scientific reports (2017) 7 1 (7400)), Ashton F. Flinders and Yang Shen
Eddy Heat Flux Across the Antarctic Circumpolar Current Estimated from Sea Surface Height Standard Deviation, Annie Foppert, Kathleen A. Donohue, D. Randolph Watts, and Karen Tracey
AXIS-An autonomous expendable instrument system, D. M. Fratantoni, J. K. O'Brien, C. Flagg, and Thomas Rossby
Effect of boundary layer roll vortices on the development of an axisymmetric tropical cyclone, Kun Gao, Isaac Ginis, James D. Doyle, and Yi Jin
Draft genome sequences of three bacterial isolates from cultures of the marine diatom Thalassiosira rotula, Nathan S. Garcia, Cheuk Man Yung, Katherine M. Davis, Tatiana Rynearson, and Dana E. Hunt
Global evaluation of particulate organic carbon flux parameterizations and implications for atmospheric pCO2, Lucas Gloege, Galen A. McKinley, Colleen B. Mouw, and Audrey B. Ciochetto
The role of intraspecific variation in the ecological and evolutionary success of diatoms in changing environments, Anna Godhe and Tatiana Rynearson
pCO2 effects on species composition and growth of an estuarine phytoplankton community, Jason S. Grear, Tatiana A. Rynearson, Amanda L. Montalbano, Breea Govenar, and Susanne Menden-Deuer
The Florence Statement on Triclosan and Triclocarban, Rolf U. Halden, Avery E. Lindeman, Allison E. Aiello, David Andrews, William A. Arnold, Patricia Fair, Rebecca E. Fuoco, Laura A. Geer, Paula I. Johnson, Rainer Lohmann, Kristopher McNeill, Victoria P. Sacks, Ted Schettler, Roland Weber, R. Thomas Zoeller, and Arlene Blum
Quantification of Rotavirus Diarrheal Risk Due to Hydroclimatic Extremes Over South Asia: Prospects of Satellite‐Based Observations in Detecting Outbreaks, M. Alfi Hasan, Colleen B. Mouw, Antarpreet Jutla, and Ali S. Akanda
Olivine-melt relationships and syneruptive redox variations in the 1959 eruption of Kīlauea Volcano as revealed by XANES, R. T. Helz, E. Cottrell, M. N. Brounce, and K. A. Kelley
Global analysis of depletion and recovery of seabed biota after bottom trawling disturbance, Jan Geert Hiddink, Simon Jennings, Marija Sciberras, Claire L. Szostek, Kathryn M. Hughes, Nick Ellis, Adriaan D. Rijnsdorp, Robert A. McConnaughey, Tessa Mazor, Ray Hilborn, Jeremy S. Collie, C. Roland Pitcher, Ricardo O. Amoroso, Ana M. Parma, Petri Surronen, and Michel J. Kaiser
Using Polyethylene Passive Samplers to Study the Partitioning and Fluxes of PBDEs in an Urban River, Mohammed A. Khairy and Rainer Lohmann
Inter-comparison of phytoplankton functional type phenology metrics derived from ocean color algorithms and Earth System Models, Tihomir S. Kostadinov, Anna Cabré, Harish Vedantham, Irina Marinov, Astrid Bracher, Robert J.W. Brewin, Annick Bricaud, Takafumi Hirata, Toru Hirawake, Nick J. Hardman-Mountford, Colleen B. Mouw, Shovonlal Roy, and Julia Uitz
Autonomous instruments significantly expand ocean observing: An introduction to the special issue on autonomous and lagrangian platforms and sensors (ALPS), Craig M. Lee, Theresa Paluszkiewicz, Daniel L. Rudnick, Melissa M. Omand, and Robert E. Todd
Heterogeneity in mantle carbon content from CO2-undersaturated basalts, M. Le Voyer, Katherine A. Kelley, and E. H. Hauri
Editorial: Modeling the plankton-enhancing the integration of biological knowledge and mechanistic understanding, Christian Lindemann, Dag L. Aksnes, Kevin J. Flynn, and Susanne Menden-Deuer
A peculiar lens-shaped structure observed in the South China Sea, Hongyang Lin, Jianyu Hu, Zhiyu Liu, Igor M. Belkin, Zhenyu Sun, and Jia Zhu
A periodic freshwater patch detachment process from the Block Island Sound estuarine plume, Qianqian Liu, Lewis M. Rothstein, and Yiyong Luo
Aquatic Global Passive Sampling (AQUA-GAPS) Revisited – First Steps towards a Network of Networks for Organic Contaminants in the Aquatic Environment, Rainer Lohmann, Derek Muir, Eddy Y. Zeng, Lian-Jun Bao, Ian J. Allan, Kenneth Arinaitwe, Kees Booij, Paul Helm, Sarit Kaserzon, Jochen F. Mueller, Yasukuki Shibata, Foppe Smedes, Manolis Tsapakis, Charles S. Wong, and Jing You
How well does wind speed predict air‐sea gas transfer in the sea ice zone? A synthesis of radon deficit profiles in the upper water column of the Arctic Ocean, Brice Loose, Roger P. Kelly, A. Bigdeli, W. Williams, M. Rutgers van der Loeff, and S. B. Moran
Organophosphate Ester Flame Retardants and Plasticizers in ocean sediments from the North Pacific to the Arctic Ocean, Yuxin Ma, Zhiyong Xie, Rainer Lohmann, Wenying Mi, and Guoping Gao
Bio-optical Properties of Cyanobacteria Blooms in Western Lake Erie, Timothy S. Moore, Colleen B. Mouw, James M. Sullivan, Michael S. Twardowski, Ashley M. Burtner, Audrey B. Ciochetto, Malcolm N. McFarland, Aditya R. Nayak, Danna Paladino, Nicole D. Stockley, Thomas H. Johengen, Angela W. Yu, Steve Ruberg, and Alan Weidemann
Doing more with less? Balancing sampling resolution and effort in measurements of protistan growth and grazing-rates, Françoise Morison and Susanne Menden-Deuer
Expanding understanding of optical variability in Lake Superior with a 4-year dataset, Colleen B. Mouw and Audrey B. Ciochetto
A Consumer's Guide to Satellite Remote Sensing of Multiple Phytoplankton Groups in the Global Ocean, Colleen B. Mouw, Nick J. Hardman-Mountford, Séverine Alvain, Astrid Bracher, Robert J.W. Brewin, Annick Bricaud, Aurea M. Ciotti, Emmanuel Devred, Amane Fujiwara, Takafumi Hirata, Toru Hirawake, Tihomir S. Kostadinov, Shovonlal Roy, and Julia Uitz
Advances in the application of amino acid nitrogen isotopic analysis in ecological and biogeochemical studies, Naohiko Ohkouchi, Yoshito Chikaraishi, Hilary Close, Brian Fry, Thomas Larsen, Daniel J. Madigan, Matthew D. McCarthy, Kelton McMahon, Toshi Nagata, Yuichi I. Naito, Nanako O. Ogawa, Brian N. Popp, Shawn Steffan, Yoshinori Takano, Ichiro Tayasu, Alex S. J. Wyatt, Yasuhiko T. Yamaguchi, and Yusuke Yokoyama
Using bio-optics to reveal phytoplankton physiology from a wirewalker autonomous platform, Melissa M. Omand, Ivona Cetinić, and Andrew J. Lucas
Managed nutrient reduction impacts on nutrient concentrations, water clarity, primary production, and hypoxia in a north temperate estuary, Candace Oviatt, Leslie Smith, Jason Krumholz, Catherine Coupland, Heather Stoffel, Aimee Keller, M. Conor McManus, and Laura Reed
Beyond the vent: New perspectives on hydrothermal plumes and pelagic biology, Brennan T. Phillips
Nautilus Sample 2016: New Techniques and Partnerships, Nicole Raineault, Jeffrey Marlow, Meredith Everett, Peter Etnoyer, Marie-Helene Cormier, Vanessa Knutson, and Gonzalo Giribet
A direct estimate of poleward volume, heat, and freshwater fluxes at 59.5°N between Greenland and Scotland, T. Rossby, Gilles Reverdin, Leon Chafik, and Henrik Søiland
Navigating in a sea of genes, Tatiana A. Rynearson
Coastal Observations from a New Vantage Point, Joseph Salisbury, Curtiss Davis, Angela Erb, Chuanmin Hu, Charles Gatebe, Carolyn Jordan, Zhongping Lee, Antonio Mannino, Colleen B. Mouw, Crystal Schaaf, Blake A. Schaeffer, and Maria Tzortziou
Growth of the northeastern margin of the Tibetan Plateau by squeezing up of the crust at the boundaries, Jianyu Shi, Danian Shi, Yang Shen, Wenjin Shao, Guangqi Xue, Heping Su, and Yang Song
Is the State of the Air-Sea Interface a Factor in Rapid Intensification and Rapid Decline of Tropical Cyclones?, Alexander V. Soloviev, Roger Lukas, Mark A. Donelan, Brian K. Haus, and Isaac Ginis
A global biogeographic classification of the mesopelagic zone, Tracey T. Sutton, Malcolm R. Clark, Daniel C. Dunn, Patrick N. Halpin, Alex D. Rogers, John Guinotte, Steven J. Bograd, Martin V. Angel, Jose Angel Alvarez Perez, Karen F. Wishner, Richard L. Haedrich, Dhugal J. Lindsay, Jeffrey C. Drazen, Alexander Vereshchaka, Uwe Piatkowski, Telmo Morato, Katarzyna Błachowiak-Samołyk, Bruce H. Robinson, Kristina M. Gjerde, Annelies Pierrot-Bults, Patricio Bernal, Gabriel Reygondeau, and Mikko Heino
Characteristics of river flood and storm surge interactions in a tidal river in Rhode Island, USA, Fei Teng, Qi Shen, Wenrui Huang, Isaac Ginis, and Yi Cai
Spatial and Temporal Variability in Macroalgal Blooms 1 in a Eutrophied Coastal Estuary, Carol S. Thornber, Michele Guidone, Christopher Deacutis, Lindsay Green, Christine N. Ramsay, and Melissa Palmisciano
Bottom temperatures in drake passage, Karen L. Tracey, Kathleen A. Donohue, and D. Randolph Watts
Using stable isotopes and gas concentrations for independent constraints on microbial methane oxidation at Arctic Ocean temperatures, Christiane Uhlig and Brice Loose
Screening for halogenated flame retardants in European consumer products, building materials and wastes, Šimon Vojta, Jitka Bečanová, Lisa Melymuk, Klára Komprdová, Jiří Kohoutek, Petr Kukučka, and Jana Klánová
Organophosphate esters flame retardants in the indoor environment, Martina Vykoukalová, Marta Venier, Šimon Vojta, Lisa Melymuk, Jitka Bečanová, Kevin Romanak, Roman Prokeš, Joseph O. Okeme, Amandeep Saini, Miriam L. Diamond, and Jana Klánová
Multi-Spectral Remote Sensing of Phytoplankton Pigment Absorption Properties in Cyanobacteria Bloom Waters: A Regional Example in the Western Basin of Lake Erie, Guoqing Wang, Zhongping Lee, and Colleen Mouw
Evidence for environmental and ecological selection in a microbe with no geographic limits to gene flow, Kerry A. Whittaker and Tatiana A. Rynearson
Determining the Pixel-to-Pixel Uncertainty in Satellite-Derived SST Fields, Fan Wu, P. C. Cornillon, Brahim Boussidi, and Lei Guan
Evaluation of the precision in level-2 avhrr sea surface temperature fields, Fan Wu, Peter Cornillon, Lei Guan, and Lele Li
Headwaters to oceans: Ecological and biogeochemical contrasts across the aquatic continuum, Marguerite A. Xenopoulos, John A. Downing, M. Dileep Kumar, Susanne Menden-Deuer, and Maren Voss
Induced earthquakes in the development of unconventional energy resources, Hong Feng Yang, Ya Jing Liu, Meng Wei, Jian Cang Zhuang, and Shi Yong Zhou
Vertical Profiles, Sources and Transport of PFASs in the Arctic Ocean, Leo W. Y. Yeung, Clifton Dassuncao, Scott Mabury, Elsie M. Sunderland, Xianming Zhang, and Rainer Lohmann
North Atlantic Deep Water formation inhibits high Arctic contamination by continental perfluorooctane sulfonate discharges, Xianming Zhang, Yanxu Zhang, Clifton Dassuncao, Rainer Lohmann, and Elsie M. Sunderland
Manuscripts from 2016
Hydrogen Utilization Potential in Subsurface Sediments, Rishi R. Adhikari, Clemens Glombitza, Julia C. Nickel, Chloe H. Anderson, Ann G. Dunlea, Arthur J. Spivack, Richard W. Murray, Steven D'Hondt, and Jens Kallmeyer
Species composition and abundance of copepods in the morphologically cryptic genus Pseudocalanus in the Bering Sea, Jennifer Bailey, Edward G. Durbin, and Tatiana Rynearson
Traits controlling body size in copepods: separating general constraints from species-specific strategies, Neil S. Banas and Robert G. Campbell
Imaging Rayleigh wave attenuation with USArray, Xueyang Bao, Colleen A. Dalton, Ge Jin, James B. Gaherty, and Yang Shen
Assessing waveform predictions of recent three-dimensional velocity models of the Tibetan Plateau, Xueyang Bao and Yang Shen
Annual dynamics of perfluorinated compounds in sediment: A case study in the Morava River in Zlín district, Czech Republic, Jitka Bečanová, Klára Komprdová, Branislav Vrana, and Jana Klánová
Screening for perfluoroalkyl acids in consumer products, building materials and wastes, Jitka Bečanová, Lisa Melymuk, Šimon Vojta, Klára Komprdová, and Jana Klánová
The Fina Nagu volcanic complex: Unusual submarine arc volcanism in the rapidly deforming southern Mariana margin, Maryjo Brounce, Katherine A. Kelley, Robert Stern, Fernando Martinez, and Elizabeth Cottrell
Exploring the occurrence and distribution of contaminants of emerging concern through unmanned sampling from ships of opportunity in the North Sea, Miroslav Brumovský, Jitka Bečanová, Jiří Kohoutek, Henrike Thomas, Wilhelm Petersen, Kai Sørensen, Ondřej Sáňka, and Luca Nizzetto
Temporal variation of Skeletonema community composition from a long-term time series in Narragansett Bay identified using high-throughput DNA sequencing, Kelly L. Canesi and Tatiana A. Rynearson
Hydrothermal venting and mineralization in the crater of Kick'em Jenny submarine volcano, Grenada (Lesser Antilles), Steven Carey, Rene Olsen, Katerine L.C. Bell, Robert Ballard, Frederic Dondin, Christopher Roman, Clara Smart, Marvin Lilley, John Lupton, Brad A. Seibel, Winton Cornell, and Craig Moyer
Genetically distinct populations of a diatom co-exist during the North Atlantic spring bloom, Gang Chen and Tatiana A. Rynearson
Influence of hydrothermal venting on water column properties in the crater of the Kolumbo submarine volcano, Santorini volcanic field (Greece), Maria E. Christopoulou, Theo J. Mertzimekis, Paraskevi Nomikou, Dimitrios Papanikolaou, Steven Carey, and Manolis Mandalakis
Unexpected prevalence of parasite 18S rDNA sequences in winter among Antarctic marine protists, Alison C. Cleary and Edward G. Durbin
Winter distribution and size structure of Antarctic krill Euphausia superba populations in-shore along the West Antarctic Peninsula, Alison C. Cleary, Edward G. Durbin, Maria C. Casas, and Meng Zhou
Feeding by Pseudocalanus copepods in the Bering Sea: Trophic linkages and a potential mechanism of niche partitioning, Alison C. Cleary, Edward G. Durbin, Tatiana A. Rynearson, and Jennifer Bailey
Ecosystem models for fisheries management: Finding the sweet spot, Jeremy S. Collie, Louis W. Botsford, Alan Hastings, Isaac C. Kaplan, John L. Largier, Patricia A. Livingston, Éva Plagányi, Kenneth A. Rose, Brian K. Wells, and Francisco E. Werner
Single-cell PCR of the luciferase conserved catalytic domain reveals a unique cluster in the toxic bioluminescent dinoflagellate Pyrodinium bahamense, Kathleen D. Cusick, Steven W. Wilhelm, Paul E. Hargraves, and Gary S. Sayler
Sea surface height variability in drake passage, Kathleen A. Donohue, Maureen A. Kennelly, and Amy Cutting
Mean Antarctic Circumpolar Current transport measured in Drake Passage, Kathleen A. Donohue, K. L. Tracey, D. Randolph Watts, M. P. Chidichimo, and T. K. Chereskin
Loop Current Eddy Formation and Baroclinic Instability, Kathleen A. Donohue, D. R. Watts, P. Hamilton, R. Leben, and M. Kennelly
Gulf of Mexico Loop Current path variability, K. A. Donohue, D. R. Watts, P. Hamilton, R. Leben, M. Kennelly, and A. Lugo-Fernández
Radiolytic Hydrogen Production in the Subseafloor Basaltic Aquifer, Mary E. Dzaugis, Arthur J. Spivack, Ann G. Dunlea, Richard W. Murray, and Steven D'Hondt
Early Career Workshop at Aslo Summer Meeting Provides Tips to Improve Funding Success, Christopher T. Filstrup, Kevin C. Rose, Xi Xiao, Hideyuki Doi, Andrea K. Johnson, and Susanne Menden-Deuer
Metagenomic Signatures of Bacterial Adaptation to Life in the Phyllosphere of a Salt-Secreting Desert Tree, Omri M. Finkel, Tom O. Delmont, Anton F. Post, and Shimshon Belkin
Bottom pressure torque and the vorticity balance from observations in Drake Passage, Yvonne L. Firing, Teresa K. Chereskin, D. Randolph Watts, and Matthew R. Mazloff
The Polar Front in Drake Passage: A composite‐mean stream‐coordinate view, Annie Foppert, Kathleen A. Donohue, and D. Randolph Watts
Destabilization of glacial climate by the radiative impact of Atlantic Meridional Overturning Circulation disruptions, Eric D. Galbraith, Timothy M. Merlis, and Jaime B. Palter
On the Equilibrium-State Roll Vortices and Their Effects in the Hurricane Boundary Layer, Kun Gao and Isaac Ginis
Physical and optical properties of phytoplankton-rich layers in a coastal fjord: a step toward prediction and strategic sampling of plankton patchiness, Jason R. Graff and Susanne Menden-Deuer
The role of crustal and eruptive processes versus source variations in controlling the oxidation state of iron in Central Andean magmas, Stephanie B. Grocke, Elizabeth Cottrell, Shanaka de Silva, and Katherine A. Kelley
A Vulnerability Assessment of Fish and Invertebrates to Climate Change on the Northeast U.S. Continental Shelf, Jonathan A. Hare, Wendy E. Morrison, Mark W. Nelson, Megan M. Stachura, Eric J. Teeters, Roger B. Griffs, Michael A. Alexander, James D. Scott, Larry Alade, Richard J. Bell, Antonie S. Chute, Kiersten L. Curti, Tobey H. Curtis, Daniel Kircheis, John F. Kocik, Sean M. Lucey, Camilla T. McCandless, Lisa M. Milke, David E. Richardson, Eric Robillard, Harvey J. Walsh, M. Connor McManus, Katrin E. Marancik, and Carolyn A. Grisworld
Detection of Poly- and Perfluoroalkyl Substances (PFASs) in U.S. Drinking Water Linked to Industrial Sites, Military Fire Training Areas, and Wastewater Treatment Plants, Xindi C. Hu, David Q. Andrews, Andrew B. Lindstrom, Thomas A. Bruton, Laurel A. Schaider, Philippe Grandjean, Rainer Lohmann, Courtney C. Carignan, Arlene Blum, Simona A. Balan, Christopher P. Higgins, and Elise M. Sunderland
Environmental change explains cichlid adaptive radiation at Lake Malawi over the past 1.2 million years, Sarah J. Ivory, Margaret W. Blome, John W. King, Michael M. McGlue, Julia E. Cole, and Andrew S. Cohen