Publications from the Department of Cell and Molecular Biology faculty at the University of Rhode Island.

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Submissions from 2019

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Evidence for activated Lck protein tyrosine kinase as the driver of proliferation in acute myeloid leukemia cell, CTV-1, Li Li, Yixin Cui, Jinyan Shen, Hannah Dobson, and Gongqin Sun

Submissions from 2018

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Structural versatility that serves the function of the HRD motif in the catalytic loop of protein tyrosine kinase, Src, Yixin Cui and Gongqin Sun

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Upregulation of HLA‐E by dengue and not Zika viruses, Elena Drews, Awadalkareem Adam, Phone Htoo, Elizabeth Townsley, and Anuja Mathew

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An Essential Staphylococcus Aureus Cell Division Protein Directly Regulates FtsZ Dynamics, Prahathees J. Eswara, Robert S. Brzozowski, Marissa G. Viola, Gianni Graham, Catherine Spanoudis, Catherine Trebino, Jyoti Jha, Joseph I. Aubee, Karl M. Thompson, Jodi L. Camberg, and Kumaran S. Ramamurthi

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Histone Methylation by SETD1A Protects Nascent DNA through the Nucleosome Chaperone Activity of FANCD2, Martin R. Higgs, Koichi Sato, John J. Reynolds, Shabana Begum, Rachel Bayley, Amalia Goula, Audrey Vernet, Karissa L. Paquin, David G. Skalnik, Wataru Kobayashi, Minoru Takata, Niall G. Howlett, Hitoshi Kurumizaka, Hiroshi Kimura, and Grant S. Stewart

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Draft Genome Sequence of Bowmanella denitrificans JL63, a Bacterium Isolated from Whiteleg Shrimp (Litopenaeus vannamei) That Can Inhibit the Growth of Vibrio Parahaemolyticus, Jason P. LaPorte, Edward J. Spinard, Marta Gomez-Chiarri, David C. Rowley, John J. Mekalanos, and David R. Nelson

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Evolution of the Natural Transformation Protein, ComEC, in Bacteria, Zachary T. Pimentel and Ying Zhang

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Draft Genome Sequence of the Putative Marine Pathogen Aquimarina sp. Strain I32.4, Hilary J. Ranson, Edward Spinard, Andrei Y. Chistoserdov, Marta Gomez-Chiarri, David R. Nelson, and David C. Rowley

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Addendum: Comparative Genomic Analysis of the Class Epsilonproteobacteria and Proposed Reclassification to Epsilonbacteraeota (phyl. nov.), David W. Waite, Inka Vanwonterghem, Christian Rinke, Donovan H. Parks, Ying Zhang, Ken Takai, Stefan M. Sievert, Jörg Simon, Barbara J. Campbell, Thomas E. Hanson, Tanja Woyke, Martin G. Klotz, and Philip Hugenholtz

Submissions from 2017

A Genome-Scale Model of Shewanella piezotolerans Simulates Mechanisms of Metabolic Diversity and Energy Conservation, Keith Dufault-Thompson, Huahua Jian, Ruxue Cheng, Jiefu Li, Fengping Wang, and Ying Zhang

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Selectable marker independent transformation of recalcitrant maize inbred B73 and sorghum P898012 mediated by morphogenic regulators BABY BOOM and WUSCHEL2, Muruganatham Mookkan, Kimberly Nelson-Vasilchik, Joel Hague, Zhanyuan J. Zhang, and Albert P. Kausch

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Isocitrate Dehydrogenase Mutation in Vibrio anguillarum Results in Virulence Attenuation and Immunoprotection in Rainbow Trout (Oncorhynchus mykiss), Xiangyu Mou, Edward J. Spinard, Shelby L. Hillman, and David R. Nelson

Submissions from 2016

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Advancing Crop Transformation in the Era of Genome Editing, Fredy Altpeter, Nathan M. Springer, Laura E. Bartley, Ann E. Blechl, Thomas P. Brutnell, Vitaly Citovsky, Liza J. Conrad, Stanton B. Gelvin, David P. Jackson, Albert P. Kausch, Peggy G. Lemaux, June I. Medford, Martha L. Orozco-Cárdenas, David M. Tricoli, Joyce Van Eck, Daniel F. Voytas, Virginia Walbot, Kan Wang, Zhanyuan J. Zhang, and C. Neal Stewart Jr.

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Draft Genome Sequence of the New Pathogen for Bivalve Larvae Vibrio bivalvicida, Javier Dubert, Edward J. Spinard, David R. Nelson, Marta Gomez-Chiarri, Jesus L. Romalde, and Juan L. Barja

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Contributions of Tropodithietic Acid and Biofilm Formation to the Probiotic Activity of Phaeobacter Inhibens, Marta Gomez-Chiarri, David C. Rowley, and David R. Nelson

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Control of sexuality by the sk1-encoded UDP-glycosyltransferase of maize, Andrew P. Hayward, Maria A. Moreno, Thomas P. Howard III, Joel Hague, Kimberly Nelson, Christopher Heffelfinger, Sandra Romero, Albert P. Kausch, Gaétan Glauser, Ivan F. Acosta, John P. Mottinger, and Stephen L. Dellaporta

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Thyrotropin Receptor Epitope and Human Leukocyte Antigen in Graves’ Disease, Hidefumi Inaba, Leslie J. De Groot, and Takashi Akamizu

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In situ embryo rescue for generation of wide intra- and interspecific hybrids of Panicum virgatum L., Albert P. Kausch, Michael Tilelli, Joel Hague, Christopher Heffelfinger, David Cunha, Maria Moreno, Stephen L. Dellaporta, and Kimberly Nelson

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In Situ Embryo Rescue for Generation of Wide Intra- and Interspecific Hybrids of Panicum virgatum L., Albert P. Kausch, Michael Tilelli, Joel Hague, Christopher Heffelfinger, David Cunha, Maria Moreno, Stephen Dellaporta, and Kimberly Nelson

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Draft Genome Sequence of Aliiroseovarius crassostreae CV919-312, the Causative Agent of Roseovarius Oyster Disease (Formerly Juvenile Oyster Disease), Linda Kessner, Edward Spinard, Marta Gomez-Chiarri, David C. Rowley, and David R. Nelson

Uropathogenic Escherichia coli Metabolite-Dependent Quiescence and Persistence May Explain Antibiotic Tolerance during Urinary Tract Infection, Mary P. Leatham-Jensen, Matthew E. Mokszycki, David C. Rowley, Robert Deering, Jodi L. Camberg, Evgeni V. Sokurenko, Veronika L. Tchesnokova, Jakob Frimodt-Møller, Karen A. Krogfelt, Karen Leth Nielsen, Niels Frimodt-Møller, Gongqin Sun, and Paul S. Cohen

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Draft Genome Sequence of the Emerging Bivalve Pathogen Vibrio tubiashii subsp. europaeus, Edward J. Spinard, Javier Dubert, David R. Nelson, Marta Gomez-Chiarri, and Juan L. Barja

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The Simple Chordate Ciona intestinalis Has a Reduced Complement of Genes Associated with Fanconi Anemia, Edward C. Stanley, Paul A. Azzinaro, David A. Vierra, Niall G. Howlett, and Steven Q. Irvine

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PSAMM: A Portable System for the Analysis of Metabolic Models, Jon Lund Steffensen, Keith Dufault-Thompson, and Ying Zhang

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The PTEN Phosphatase Functions Cooperatively with the Fanconi Anemia Proteins in DNA Crosslink Repair, Elizabeth A. Vuono, Ananda Mukherjee, David A. Vierra, Morganne M. Adroved, Charlotte Hodson, Andrew J. Deans, and Niall G. Howlett

Submissions from 2015

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Draft Genome Sequence of the Shellfish Larval Probiotic Bacillus pumilus RI06-95, Meagan Hamblin, Edward Spinard, Marta Gomez-Chiarri, David R. Nelson, and David C. Rowley

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Effects of CO2 on Growth Rate, C:N:P, and Fatty Acid Composition of Seven Marine Phytoplankton Species, Andrew L. King, Bethany D. Jenkins, Joselynn R. Wallace, Yuan Liu, Gary H. Wikfors, Lisa M. Milke, and Shannon L. Meseck

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Escherichia coli EDL933 Requires Gluconeogenic Nutrients To Successfully Colonize the Intestines of Streptomycin-Treated Mice Precolonized with E. coli Nissle 1917, Silvia A. C. Schinner, Matthew E. Mokszycki, Jimmy Adediran, Mary Leatham-Jensen, and Paul S. Cohen

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Draft Genome Sequence of the Marine Pathogen Vibrio coralliilyticus RE22, Edward Spinard, Linda Kessner, Marta Gomez-Chiarri, D. C. Rowley, and David R. Nelson

Submissions from 2014

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Profiling Gene Expression to Distinguish the Likely Active Diazotrophs from a Sea of Genetic Potential in Marine Sediments, S M. Brown and Bethany D. Jenkins

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Location of Dual Sites in E. coli FtsZ Important for Degradation by ClpXP; One at the C-Terminus and One in the Disordered Linker, Jodi L. Camberg, Marissa G. Viola, Leslie Rea, Joel R. Hoskins, and Sue Wickner

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Human leptospirosis in The Federated States of Micronesia: a hospital-based febrile illness survey, Susannah Colt, Boris I. Pavlin, Jacob L. Kool, Eliaser Johnson, Judith P. McCool, and Alistair J. Woodward

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Meeting Report: Ocean ‘Omics Science, Technology and Cyberinfrastructure: Current Challenges and Future Requirements (August 20-23, 2013), Jack A. Gilbert, Gregory J. Dick, Bethany D. Jenkins, John Heidelberg, Eric Allen, Katherine R.M. Mackey, and Edward F. DeLong

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Flexible and Scalable Genotyping-by-Sequencing Strategies for Population Studies, Christopher Heffelfinger, Christopher A. Fragoso, Maria A. Moreno, John D. Overton, John P. Mottinger, Hongyu Zhao, Joe Tohme, and Stephen L. Dellaporta

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Identification of the Maize Gravitropism Gene lazy plant1 by a Transposon-Tagging Genome Resequencing Strategy, Thomas P. Howard III, Andrew P. Hayward, Anthony Tordillos, Christopher Fragoso, Maria A. Moreno, Joe Tohme, Albert P. Kausch, John P. Mottinger, and Stephen L. Dellaporta

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The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the Functional Diversity of Eukaryotic Life in the Oceans Through Transcriptome Sequencing, Patrick J. Keeling, Fabien Burki, Heather M. Wilcox, Bassem Allam, Eric E. Allen, Linda A. Amaral-Zettler, E. Virginia Armbrust, John M. Archibald, Arvind K. Bharti, Callum J. Bell, Bank Beszteri, Kay D. Bidle, Connor T. Cameron, Lisa Campbell, David A. Caron, Rose Ann Cattolico, Jackie L. Collier, Kathryn Coyne, Simon K. Davy, Phillipe Deschamps, Sonya T. Dyhrman, Bente Edvardsen, Ruth D. Gates, Christopher J. Gobler, Spencer J. Greenwood, Stephanie M. Guida, Jennifer L. Jacobi, Kjetill S. Jakobsen, Erick R. James, Bethany D. Jenkins, Uwe John, Matthew D. Johnson, Andrew R. Juhl, Anja Kamp, Laura A. Katz, Ronald Kiene, Alexander Kurdryavtsev, Brian S. Leander, Senjie Lin, Connie Lovejoy, Denis Lynn, Adrian Marchetti, George McManus, Aurora M. Nedelcu, Susanne Menden-Deuer, Cristina Miceli, Thomas Mock, Marina Montresor, Mary Ann Moran, Shauna Murray, Govind Nadathur, Satoshi Nagai, Peter B. Ngam, Brian Palenik, Jan Pawlowski, Giulio Petroni, Gwenael Piganeau, Matthew C. Posewitz, Karin Rengefors, Giovanna Romano, Mary E. Rumpho, Tatiana Rynearson, Kelly B. Schilling, Declan C. Schroeder, Alastair G.B. Simpson, Claudio H. Slamovits, David R. Smith, G. Jason Smith, Sara R. Smith, Heidi M. Sosik, Peter Stief, Edward Theriot, Scott N. Twary, Pooja E. Umale, Daniel Vaulot, Boris Wawrik, Glen L. Wheeler, William H. Wilson, Yan Xu, Adriana Zingone, and Alexandra Z. Worden

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Escherichia coli Pathotypes Occupy Distinct Niches in the Mouse Intestine, Jessica P. Meador, Matthew E. Caldwell, Paul S. Cohen, and Tyrrell Conway

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A High Throughput MHC II Binding Assay for Quantitative Analysis of Peptide Epitopes, Regina Salvat, Leonard Moise, Chris Bailey-Kellogg, and Karl E. Griswold

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Cyclic Peptide-Capped Gold Nanoparticles for Enhanced siRNA Delivery, Amir Nasrolahi Shirazi, Karissa L. Paquin, Niall G. Howlett, Dindyal Mandal, and Keykavous Parang

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Pan-Genome Analyses Identify Lineage- and Niche-Specific Markers of Evolution and Adaptation in Epsilonproteobacteria, Ying Zhang and Stefan M. Sievert

Submissions from 2013

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An Escherichia coli Nissle 1917 Missense Mutant Colonizes the Streptomycin-Treated Mouse Intestine Better than the Wild Type but Is Not a Better Probiotic, Jimmy Adediran, Mary P. Leatham-Jensen, Matthew E. Mokszycki, Jakob Frimodt-Møller, Karen A. Krogfelt, Krystyna Kazmierczak, Linda J. Kenney, Tyrrell Conway, and Paul S. Cohen

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Microbial Community Structure of a Leachfield Soil: Response to Intermittent Aeration and Tetracycline Addition, Janet A. Atoyan, Andrew M. Staroscik, David R. Nelson, Erika L. Patenaude, David A. Potts, and José A. Amador

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Coordinate Nuclear Targeting of the FANCD2 and FANCI Proteins via a FANCD2 Nuclear Localization Signal, Rebecca A. Boisvert, Meghan A. Rego, Paul A. Azzinaro, Maurizio Mauro, and Niall G. Howlett

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Thalassiosira spp. Community Composition Shifts in Response to Chemical and Physical Forcing in the Northeast Pacific Ocean, P. Dreux Chappell, LeAnn P. Whitney, Traci L. Haddock, Susanne Menden-Deuer, Eric G. Roy, Mark L. Wells, and Bethany D. Jenkins

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Towards Independent Particle Reconstruction from Cryogenic Transmission Electron Microscopy, W. Lewis Collier, Jean Yves Hervé, and Lenore Martin

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Probiotic Strains for Shellfish Aquaculture: Protection of Eastern Oyster, Crassostrea virginica, Larvae and Juveniles Againsl Bacterial Challenge, Murni Karim, Wenjing Zhao, David C. Rowley, David R. Nelson, and Marta Gomez-Chiarri

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Characterization of Plp, a Phosphatidylcholine-Specific Phospholipase and Hemolysin of Vibrio anguillarum, Ling Li, Xiangyu Mou, and David R. Nelson

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Nutritional Basis for Colonization Resistance by Human Commensal Escherichia coli Strains HS and Nissle 1917 Against E. coli O157:H7 in the Mouse Intestine, Rosalie Maltby, Mary P. Leatham-Jensen, Terri Gibson, Paul S. Cohen, and Tyrrell Conway

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Immunization with Cross-Conserved H1N1 Influenza CD4+ T-Cell Epitopes Lowers Viral Burden in HLA DR3 Transgenic Mice, Leonard Moise, Ryan Tassone, Howard Latimer, Frances Terry, Lauren Levitz, John P. Haran, Ted M. Ross, Christine Boyle, William D. Martin, and Anne S. De Groot

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H-NS Is a Negative Regulator of the Two Hemolysin/Cytotoxin Gene Clusters in Vibrio anguillarum, Xiangyu Mou, Edward J. Spinard, Maureen V. Driscoll, Weinjing Zhao, and David R. Nelson

Submissions from 2012

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The Transcriptome and Proteome of the Diatom Thalassiosira Pseudonana Reveal a Diverse Phosphorus Stress Response, Sonya T. Dyhrman, Bethany D. Jenkins, Tatiana A. Rynearson, Mak A. Saito, Melissa Mercier, Harriet Alexander, LeAnn P. Whitney, Andrea Drzewianowski, Vladimir V. Bulygin, Erin M. Bertrand, Zhijin Wu, Claudia Benitez-Nelson, and Abigail Heithoff

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Pollen Sterility—A Promising Approach to Gene Confinement and Breeding for Genetically Modified Bioenergy Crops, Joel P. Hague, Stephen L. Dellaporta, Maria A. Moreno, Chip Longo, Kimberly Nelson, and Albert P. Kausch

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The Streptomycin-Treated Mouse Intestine Selects Escherichia coli envZ Missense Mutants That Interact with Dense and Diverse Intestinal Microbiota, Mary P. Leatham-Jensen, Jakob Frimodt-Møller, Jimmy Adediran, Matthew E. Mokszycki, Megan E. Banner, Joyce E. Caughron, Karen A. Krogfelt, Tyrrell Conway, and Paul S. Cohen

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p21 promotes error-free replication-coupled DNA double-strand break repair, Maurizio Mauro, Meghan A. Rego, Rebecca A. Boisvert, Fumiko Esashi, Francesca Cavallo, Maria Jasin, and Niall G. Howlett

Submissions from 2011

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Genotype and Phenotypes of an Intestine-Adapted Escherichia coli K-12 Mutant Selected by Animal Passage for Superior Colonization, Andrew J. Fabich, Mary P. Leatham, Joe E. Grissom, Graham Wiley, Hongshing Lai, Fares Najar, Bruce A. Roe, Paul S. Cohen, and Tyrrell Conway

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Characterization of Putative Iron Responsive Genes as Species-specific Indicators of Iron Stress in Thalassiosiroid Diatoms, Bethany D. Jenkins, LeAnn P. Whitney, Jeremy J. Lins, Margaret P. Hughes, Mark L. Wells, and P. Dreux Chappell

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Anaerobic Respiration of Escherichia coli in the Mouse Intestine, Shari A. Jones, Terri Gibson, Rosalie C. Maltby, Fatema Z. Chowdhury, Valley Stewart, Paul S. Cohen, and Tyrrell Conway

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HlyU Is a Positive Regulator of Hemolysin Expression in Vibrio anguillarum, Ling Li, Xiangyu Mou, and David R. Nelson

Submissions from 2010

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The Chitobiose Transporter, chbC, is Required for Chitin Utilization in Borrelia Burgdorferi, Ryan G. Rhodes, Janet A. Atoyan, and David R. Nelson

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Empirical Bayes Analysis of Sequencing-Based Transcriptional Profiling Without Replicates, Zhijin Wu, Bethany D. Jenkins, Tatiana A. Rynearson, Sonya T. Dyhrman, Mak A. Saito, Melissa Mercier, and LeAnn P. Whitney

Submissions from 2009

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The Pic Protease of Enteroaggregative Escherichia coli Promotes Intestinal Colonization and Growth in the Presence of Mucin, Susan M. Harrington, Jalaluddin Sheikh, Ian R. Henderson, Fernando Ruiz-Perez, Paul S. Cohen, and James P. Nataro

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Functional Interaction between the Fanconi Anemia D2 Protein and Proliferating Cell Nuclear Antigen (PCNA) via a Conserved Putative PCNA Interaction Motif, Niall G. Howlett, Julie A. Harney, Meghan A. Rego, Frederick W. Kolling IV, and Thomas W. Glover

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Direct and specific inactivation of protein tyrosine kinases in the Src and FGFR families by reversible cysteine oxidation, David J. Kemble and Gongqin Sun

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Precolonized Human Commensal Escherichia coli Strains Serve as a Barrier to E. coli O157:H7 Growth in the Streptomycin-Treated Mouse Intestine, Mary P. Leatham, Swati Banerjee, Steven M. Autieri, Regino Mercado-Lubo, Tyrrell Conway, and Paul S. Cohen

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Novel Features of the Polysaccharide-Digesting Gliding Bacterium Flavobacterium johnsoniae as Revealed by Genome Sequence Analysis, Mark J. McBride, Gary Xie, Eric C. Martens, Alla Lapidus, Bernard Henrissat, Ryan G. Rhodes, Eugene Goltsman, Wei Wang, Jian Xu, David W. Hunnicutt, Andrew M. Staroscik, Timothy R. Hoover, Yi-Qiang Cheng, and Jennifer L. Stein

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Salmonella enterica Serovar Typhimurium Mutants Unable To Convert Malate to Pyruvate and Oxaloacetate Are Avirulent and Immunogenic in BALB/c Mice, Regino Mercado-Lubo, Mary P. Leatham, Tyrrell Conway, and Paul S. Cohen

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Chitobiose Utilization in Borrelia burgdorferi is Dually Regulated by RpoD and RpoS, Ryan G. Rhodes, Wendy M. Coy, and David R. Nelson

Submissions from 2008

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Comparison of Carbon Nutrition for Pathogenic and Commensal ,Escherichia coli Strains in the Mouse Intestine, Andrew J. Fabich, Shari A. Jones, Fatema Z. Chowdhury, Amanda Cernosek, April Anderson, Darren Smalley, J. Wesley McHargue, G. Aaron Hightower, Joel T. Smith, Steven M. Autieri, Mary P. Leatham, Jeremy J. Lins, Regina L. Allen, David C. Laux, Paul S. Cohen, and Tyrrell Conway

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Glycogen and Maltose Utilization by Escherichia coli O157:H7 in the Mouse Intestine, Shari A. Jones, Mathias Jorgensen, Fatema Z. Chowdhury, Rosalie Rodgers, James Hartline, Mary P. Leatham, Carsten Struve, Karen A. Krogfelt, Paul S. Cohen, and Tyrrell Conway

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Identification and Characterization of a Repeat-in-Toxin Gene Cluster in Vibrio anguillarum, Ling Li, Jessica L. Rock, and David R. Nelson

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A Salmonella enterica Serovar Typhimurium Succinate Dehydrogenase/Fumarate Reductase Double Mutant Is Avirulent and Immunogenic in BALB/c Mice, Regino Mercado-Lubo, Eric J. Gauger, Mary P. Leatham, Tyrrell Conway, and Paul S. Cohen

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Development of Methods for the Genetic Manipulation of Flavobacterium columnare, Andrew M. Staroscik, David W. Hunnicutt, Kate E. Archibald, and David R. Nelson

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Identification and Characterization of Epp, the Secreted Processing Protease for the Vibrio anguillarum EmpA Metalloprotease, Maureen Varina, Steven M. Denkin, Andrew M. Staroscik, and David R. Nelson

Submissions from 2007

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l-Fucose Stimulates Utilization of d-Ribose by Escherichia coli MG1655 ΔfucAO and E. coli Nissle 1917 ΔfucAO Mutants in the Mouse Intestine and in M9 Minimal Medium, Steven M. Autieri, Jeremy J. Lins, Mary P. Leatham, David C. Laux, Tyrrell Conway, and Paul S. Cohen

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Role of Motility and the flhDC Operon in Escherichia coli MG1655 Colonization of the Mouse Intestine, Eric J. Gauger, Mary P. Leatham, Regino Mercado-Lubo, David C. Laux, Tyrrell Conway, and Paul S. Cohen

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Respiration of Escherichia coli in the Mouse Intestine, Shari A. Jones, Fatema Z. Chowdhury, Andrew J. Fabich, April Anderson, Darrel M. Schreiner, Anetra L. House, Steven M. Autieri, Mary P. Leatham, Jeremy J. Lins, Mathias Jorgensen, Paul S. Cohen, and Tyrrell Conway

Submissions from 2006

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Docking-based Substrate Recognition by the Catalytic Domain of a Protein Tyrosine Kinase, C-terminal Src Kinase (Csk), Sungsoo Lee, Marina K. Ayrapetov, David J. Kemble, Keykavous Parang, and Gongqin Sun

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Identification and Characterization of a Hemolysin Gene Cluster in Vibrio anguillarum, Jessica L. Rock and David R. Nelson

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Role of Gluconeogenesis and the Tricarboxylic Acid Cycle in the Virulence of Salmonella enterica Serovar Typhimurium in BALB/c Mice, Merlin Tchawa Yimga, Mary P. Leatham, James H. Allen, David C. Laux, Tyrrell Conway, and Paul S. Cohen

Submissions from 2005

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Mouse Intestine Selects Nonmotile flhDC Mutants of Escherichia coli MG1655 with Increased Colonizing Ability and Better Utilization of Carbon Sources, Mary P. Leatham, Sarah J. Stevenson, Eric J. Gauger, Karen A. Krogfelt, Jeremy J. Lins, Traci L. Haddock, Steven M. Audtieri, Tyrrell Conway, and Paul S. Cohen

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Phosphoryl Transfer Step in the C-terminal Src Kinase Controls Src Recognition, Scot A. Lieser, Caitlin Shindler, Brandon E. Aubol, Sungsoo Lee, Gongqin Sun, and Joseph A. Adams

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Characterization of the Interactions Between the Active Site of a Protein Tyrosine Kinase and a Divalent Metal Activator, Xiaofeng Lin, Marina K. Ayrapetov, and Gongqin Sun

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Regulation of the Vibrio anguillarum Metalloprotease EmpA by Posttranslational Modification, Andrew M. Staroscik, Steven M. Denkin, and David R. Nelson

Submissions from 2004

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Carbon nutrition of Escherichia coli in the mouse intestine, Dong-Eun Chang, Darren J. Smalley, Don L. Tucker, Mary P. Leatham, Wendy E. Norris, Sarah J. Stevenson, April B. Anderson, Joe E. Grissom, David C. Laux, Paul S. Cohen, and Tyrrell Conway

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Regulation of Vibrio anguillarum empA Metalloprotease Expression and Its Role in Virulence, Steven M. Denkin and David R. Nelson

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Gel Shift Analysis of the empA Promoter Region in Vibrio Anguillarum, Steven M. Denkin, Pedja Sekaric, and David R. Nelson

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Glycolytic and Gluconeogenic Growth of Escherichia coli O157:H7 (EDL933) and E. coli K-12 (MG1655) in the Mouse Intestine, Regina L. Miranda, Tyrrell Conway, Mary P. Leatham, Dong Eun Chang, Wendy E. Norris, James H. Allen, Sarah J. Stevenson, David C. Laux, and Paul S. Cohen

Submissions from 2003

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Expression of spoT in Borrelia burgdorferi during Serum Starvation, Marc B. Concepcion and David R. Nelson

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Determination of the substrate-docking site of protein tyrosine kinase C-terminal Src kinase, Sungsoo Lee, Xiaofeng Lin, Nguyen Hai Nam, Keykavous Parang, and Gongqin Sun

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An Escherichia coli MG1655 Lipopolysaccharide Deep-Rough Core Mutant Grows and Survives in Mouse Cecal Mucus but Fails To Colonize the Mouse Large Intestine, Annette K. Møller, Mary P. Leatham, Tyrrell Conway, Piet J.M. Nuijten, Louise A.M. de Haan, Karen A. Krogfelt, and Paul S. Cohen

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Genes of the GadX-GadW Regulon in Escherichia coli, Don L. Tucker, Nancy Tucker, Zhuo Ma, John W. Foster, Regina L. Miranda, Paul S. Cohen, and Tyrrell Conway

Submissions from 2002

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Environmental Regulation and Differential Production of Members of the Bdr Protein Family of Borrelia burgdorferi, David M. Robert, Melissa Caimano, John McDowell, Michael Theisen, Arne Holm, Edward Orff, David Nelson, Stephen Wikel, Justin Radolf, and Richard T. Marconi

Submissions from 2001

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Eradication of Biofilm-Forming Staphylococcus epidermidis (RP62A) by a Combination of Sodium Salcylate and Vancomycin, Roy E. Polonio, Leonard A. Mermel, Gregory E. Paquette, and Jay F. Sperry

Submissions from 2000

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A Functional cra Gene Is Required for Salmonella enterica Serovar Typhimurium Virulence in BALB/c Mice, James H. Allen, Maryjane Utley, Han van der Bosch, Piet Nuijten, Maarten Witvliet, Beth A. McCormick, Karen A. Krogfelt, Tine Rask Licht, Derek Brown, Michael Mauel, Mary P. Leatham, David C. Laux, and Paul S. Cohen

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rpoS Gene Function Is a Disadvantage for Escherichia coli BJ4 during Competitive Colonization of the Mouse Large Intestine, Karen A. Krogfelt, Marianne Hjulgaard, Kristine Sørensen, Paul S. Cohen, and Michael Givskov

Submissions from 1999

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Induction of Protease Activity in Vibrio anguillarum by Gastrointestinal Mucus, Steven M. Denkin and David R. Nelson

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Estimation of Growth Rates of Escherichia coli BJ4 in Streptomycin-Treated and Previously Germfree Mice by In Situ rRNA Hybridization, Camilla U. Rang, Tine Rask Licht, Tore Midtvedt, Patricia L. Conway, Lin Chao, Karen A. Krogfelt, Paul S. Cohen, and Søren Molin

Submissions from 1998

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Occurrence of Male-Specific Bacteriophage in Feral and Domestic Animal Wastes, Human Feces, and Human-Associated Wastewaters, Kevin R. Calci, William Burkhardt III, William D. Watkins, and Scott R. Rippey

Submissions from 1997

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Cysteine-to-alanine replacements in the Escherichia coli SoxR protein and the role of the [2Fe-2S] centers in transcriptional activation, Terence M. Bradley, Elena Hidalgo, Veronica Leautaud, Huangen Ding, and Bruce Demple

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Growth of Vibrio anguillarum in Salmon Intestinal Mucus, T. Garcia, K. Otto, S. Kjelleberg, and D. R. Nelson